Detailed information NTG0439353

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HG559_RS01610
• Genome accession: NZ_CP051508
• Coordinates: 330227..331027 (+)
• Length: 266 a.a.
• NCBI ID: WP_202133080.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain ASHA-010
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 325227..336027

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG559_RS01575 (HG559_01580)	pseH	325728..326270 (+)	543	WP_202166157.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HG559_RS01580 (HG559_01585)	-	326203..327141 (-)	939	WP_202166158.1	tetraacyldisaccharide 4'-kinase	-
HG559_RS01585 (HG559_01590)	-	327138..327920 (-)	783	WP_202166159.1	NAD+ synthase	-
HG559_RS01595 (HG559_01600)	ilvC	328168..329160 (+)	993	WP_202166160.1	ketol-acid reductoisomerase	-
HG559_RS01600 (HG559_01605)	minD	329179..329985 (+)	807	WP_202133079.1	septum site-determining protein MinD	-
HG559_RS01605 (HG559_01610)	minE	329982..330215 (+)	234	WP_000051411.1	cell division topological specificity factor MinE	-
HG559_RS01610 (HG559_01615)	dprA	330227..331027 (+)	801	WP_202133080.1	DNA-processing protein DprA	Machinery gene
HG559_RS01615 (HG559_01620)	dprB	331024..331428 (+)	405	WP_202133081.1	Holliday junction resolvase RuvX	Machinery gene
HG559_RS01620 (HG559_01625)	-	331556..332236 (+)	681	WP_202148237.1	tetratricopeptide repeat protein	-
HG559_RS01625 (HG559_01630)	-	332432..332770 (+)	339	WP_202135745.1	hypothetical protein	-
HG559_RS01630 (HG559_01635)	-	332754..333320 (+)	567	WP_202166161.1	hypothetical protein	-
HG559_RS01635 (HG559_01640)	-	333332..333580 (+)	249	WP_237393354.1	lysozyme	-
HG559_RS07875	-	333595..333921 (+)	327	WP_237393355.1	hypothetical protein	-
HG559_RS07880 (HG559_01650)	-	334007..334192 (+)	186	WP_014534380.1	hypothetical protein	-
HG559_RS01650 (HG559_01655)	-	334346..334732 (+)	387	WP_202133397.1	DUF1294 domain-containing protein	-
HG559_RS01655 (HG559_01660)	-	334732..335517 (+)	786	WP_202135746.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29816.72 Da
• Isoelectric Point: 8.5925

>NTDB_id=439353 HG559_RS01610 WP_202133080.1 330227..331027(+) (dprA) [Helicobacter pylori strain ASHA-010]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLAREFAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=439353 HG559_RS01610 WP_202133080.1 330227..331027(+) (dprA) [Helicobacter pylori strain ASHA-010]
ATGAAAAGCAACTTCCAATACAGCGCACTAGAGAACATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGACGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGTTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCAAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41