Detailed information NTG0439310

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HG561_RS01780
• Genome accession: NZ_CP051506
• Coordinates: 359031..359831 (+)
• Length: 266 a.a.
• NCBI ID: WP_000840086.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain SHIM-007
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 354031..364831

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG561_RS01745 (HG561_01735)	pseH	354533..355075 (+)	543	WP_000742580.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HG561_RS01750 (HG561_01740)	-	355008..355946 (-)	939	WP_202168644.1	tetraacyldisaccharide 4'-kinase	-
HG561_RS01755 (HG561_01745)	-	355943..356725 (-)	783	WP_202168645.1	NAD+ synthase	-
HG561_RS01765 (HG561_01755)	ilvC	356972..357964 (+)	993	WP_202168646.1	ketol-acid reductoisomerase	-
HG561_RS01770 (HG561_01760)	minD	357983..358789 (+)	807	WP_202168647.1	septum site-determining protein MinD	-
HG561_RS01775 (HG561_01765)	minE	358786..359019 (+)	234	WP_000051411.1	cell division topological specificity factor MinE	-
HG561_RS01780 (HG561_01770)	dprA	359031..359831 (+)	801	WP_000840086.1	DNA-processing protein DprA	Machinery gene
HG561_RS01785 (HG561_01775)	dprB	359828..360232 (+)	405	WP_202168648.1	Holliday junction resolvase RuvX	Machinery gene
HG561_RS01790 (HG561_01780)	-	360291..360449 (+)	159	WP_202168649.1	hypothetical protein	-
HG561_RS01795 (HG561_01785)	-	360462..360830 (+)	369	WP_202168650.1	tetratricopeptide repeat protein	-
HG561_RS01800 (HG561_01790)	-	361018..361356 (+)	339	WP_000699918.1	hypothetical protein	-
HG561_RS01805 (HG561_01795)	-	361340..361906 (+)	567	WP_000037138.1	hypothetical protein	-
HG561_RS01810 (HG561_01800)	-	361918..362166 (+)	249	WP_202168651.1	lysozyme	-
HG561_RS01815 (HG561_01805)	-	362172..362510 (+)	339	WP_202168652.1	hypothetical protein	-
HG561_RS01820 (HG561_01810)	-	362910..363297 (+)	388	Protein_354	DUF1294 domain-containing protein	-
HG561_RS01825 (HG561_01815)	-	363297..364082 (+)	786	WP_202168653.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29782.70 Da
• Isoelectric Point: 8.5925

>NTDB_id=439310 HG561_RS01780 WP_000840086.1 359031..359831(+) (dprA) [Helicobacter pylori strain SHIM-007]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=439310 HG561_RS01780 WP_000840086.1 359031..359831(+) (dprA) [Helicobacter pylori strain SHIM-007]
ATGAAAAGCAACTTCCAATACAGCGCACTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGATGCGCCTTTAAAAGTGGCCATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGTGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATACGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTAGAATATTGCGCCAAAAACCCGAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414