Detailed information NTG0439289

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HG562_RS01930
• Genome accession: NZ_CP051505
• Coordinates: 407469..408269 (+)
• Length: 266 a.a.
• NCBI ID: WP_202170346.1
• Uniprot ID: A0AAE7TS37
• Organism: Helicobacter pylori strain SHIM-010
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 402469..413269

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG562_RS01895 (HG562_01895)	pseH	402971..403513 (+)	543	WP_000742581.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HG562_RS01900 (HG562_01900)	-	403446..404384 (-)	939	WP_000833938.1	tetraacyldisaccharide 4'-kinase	-
HG562_RS01905 (HG562_01905)	-	404381..405163 (-)	783	WP_001168078.1	NAD+ synthase	-
HG562_RS01915 (HG562_01915)	ilvC	405410..406402 (+)	993	WP_001207777.1	ketol-acid reductoisomerase	-
HG562_RS01920 (HG562_01920)	minD	406421..407227 (+)	807	WP_001019023.1	septum site-determining protein MinD	-
HG562_RS01925 (HG562_01925)	minE	407224..407457 (+)	234	WP_000051411.1	cell division topological specificity factor MinE	-
HG562_RS01930 (HG562_01930)	dprA	407469..408269 (+)	801	WP_202170346.1	DNA-processing protein DprA	Machinery gene
HG562_RS01935 (HG562_01935)	dprB	408266..408670 (+)	405	WP_000599165.1	Holliday junction resolvase RuvX	Machinery gene
HG562_RS01940 (HG562_01940)	-	408843..409269 (+)	427	Protein_382	tetratricopeptide repeat protein	-
HG562_RS01945 (HG562_01945)	-	409463..409801 (+)	339	WP_000699918.1	hypothetical protein	-
HG562_RS01950 (HG562_01950)	-	409785..410345 (+)	561	WP_000037125.1	hypothetical protein	-
HG562_RS01955 (HG562_01955)	-	410502..411383 (-)	882	WP_001117116.1	RluA family pseudouridine synthase	-
HG562_RS01960 (HG562_01960)	recJ	411383..412933 (-)	1551	WP_000810779.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29727.62 Da
• Isoelectric Point: 8.2306

>NTDB_id=439289 HG562_RS01930 WP_202170346.1 407469..408269(+) (dprA) [Helicobacter pylori strain SHIM-010]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDTKLLDAPLKVAIIGTRIPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=439289 HG562_RS01930 WP_202170346.1 407469..408269(+) (dprA) [Helicobacter pylori strain SHIM-010]
ATGAAAAGCAACTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGATATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACAAAGCTTTTAGATGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAATACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTGAAAAGCGGC
TCTATGAGTAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTAGAATATTGTGCCAAAAACCCAAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTGGAATACGAACTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.074	81.203	0.398