Detailed information NTG0439266

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HG563_RS01775
• Genome accession: NZ_CP051504
• Coordinates: 370220..371020 (+)
• Length: 266 a.a.
• NCBI ID: WP_202273535.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain SHIM-011
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 365220..376020

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG563_RS01740 (HG563_01740)	pseH	365722..366264 (+)	543	WP_000742582.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HG563_RS01745 (HG563_01745)	-	366197..367135 (-)	939	WP_202273533.1	tetraacyldisaccharide 4'-kinase	-
HG563_RS01750 (HG563_01750)	-	367132..367914 (-)	783	WP_001168077.1	NAD+ synthase	-
HG563_RS01760 (HG563_01760)	ilvC	368161..369153 (+)	993	WP_202273534.1	ketol-acid reductoisomerase	-
HG563_RS01765 (HG563_01765)	minD	369172..369978 (+)	807	WP_075645901.1	septum site-determining protein MinD	-
HG563_RS01770 (HG563_01770)	minE	369975..370208 (+)	234	WP_000051411.1	cell division topological specificity factor MinE	-
HG563_RS01775 (HG563_01775)	dprA	370220..371020 (+)	801	WP_202273535.1	DNA-processing protein DprA	Machinery gene
HG563_RS01780 (HG563_01780)	dprB	371017..371421 (+)	405	WP_000599240.1	Holliday junction resolvase RuvX	Machinery gene
HG563_RS01785 (HG563_01785)	-	371478..372023 (+)	546	WP_202273536.1	tetratricopeptide repeat protein	-
HG563_RS01790 (HG563_01790)	-	372213..372551 (+)	339	WP_000699918.1	hypothetical protein	-
HG563_RS01795 (HG563_01795)	-	372535..373101 (+)	567	WP_000037139.1	hypothetical protein	-
HG563_RS01800 (HG563_01800)	-	373113..373361 (+)	249	WP_237419574.1	lysozyme	-
HG563_RS07730	-	373367..373744 (+)	378	WP_012443304.1	hypothetical protein	-
HG563_RS01810 (HG563_01810)	-	374106..374493 (+)	388	Protein_353	DUF1294 domain-containing protein	-
HG563_RS01815 (HG563_01815)	-	374493..375278 (+)	786	WP_202273537.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29838.70 Da
• Isoelectric Point: 8.2316

>NTDB_id=439266 HG563_RS01775 WP_202273535.1 370220..371020(+) (dprA) [Helicobacter pylori strain SHIM-011]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLDATLKVAIIGTRRPTPYSKQHTITLAREFAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHQVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=439266 HG563_RS01775 WP_202273535.1 370220..371020(+) (dprA) [Helicobacter pylori strain SHIM-011]
ATGAAAAGCAACTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGATATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGACGCGACTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGTTTGCTAAAAATGGTGCGGTTATTGTGAGTGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCACCAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTAGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTCAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATGAAAGACGAATTTTTAGAATATTGCGCCAAAAACCCGAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.865	100	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.788	84.962	0.406