Detailed information NTG0439245

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HG564_RS01765
• Genome accession: NZ_CP051503
• Coordinates: 370083..370883 (+)
• Length: 266 a.a.
• NCBI ID: WP_000840088.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain SHIM-014
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 365083..375883

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG564_RS01730 (HG564_01730)	pseH	365585..366127 (+)	543	WP_000742644.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HG564_RS01735 (HG564_01735)	-	366060..366998 (-)	939	WP_202172009.1	tetraacyldisaccharide 4'-kinase	-
HG564_RS01740 (HG564_01740)	-	366995..367777 (-)	783	WP_202172010.1	NAD+ synthase	-
HG564_RS01750 (HG564_01750)	ilvC	368024..369016 (+)	993	WP_202172011.1	ketol-acid reductoisomerase	-
HG564_RS01755 (HG564_01755)	minD	369035..369841 (+)	807	WP_001019023.1	septum site-determining protein MinD	-
HG564_RS01760 (HG564_01760)	minE	369838..370071 (+)	234	WP_000051411.1	cell division topological specificity factor MinE	-
HG564_RS01765 (HG564_01765)	dprA	370083..370883 (+)	801	WP_000840088.1	DNA-processing protein DprA	Machinery gene
HG564_RS01770 (HG564_01770)	dprB	370880..371284 (+)	405	WP_202172012.1	Holliday junction resolvase RuvX	Machinery gene
HG564_RS01775 (HG564_01775)	-	371456..371886 (+)	431	Protein_346	tetratricopeptide repeat protein	-
HG564_RS01780 (HG564_01780)	-	372075..372413 (+)	339	WP_000699918.1	hypothetical protein	-
HG564_RS01785 (HG564_01785)	-	372397..372963 (+)	567	WP_202172013.1	hypothetical protein	-
HG564_RS01790 (HG564_01790)	-	372975..373193 (+)	219	WP_014661925.1	lysozyme	-
HG564_RS01795 (HG564_01795)	-	373507..373887 (+)	381	Protein_350	DUF1294 domain-containing protein	-
HG564_RS01800 (HG564_01800)	-	373887..374672 (+)	786	WP_000488067.1	hypothetical protein	-
HG564_RS01805 (HG564_01805)	-	374662..375750 (+)	1089	WP_202172014.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29800.73 Da
• Isoelectric Point: 8.5925

>NTDB_id=439245 HG564_RS01765 WP_000840088.1 370083..370883(+) (dprA) [Helicobacter pylori strain SHIM-014]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=439245 HG564_RS01765 WP_000840088.1 370083..370883(+) (dprA) [Helicobacter pylori strain SHIM-014]
ATGAAAAGCAACTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGATGCGCCTTTAAAAGTGGCCATCATCGGCACGAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCACAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTGAAAAGCGGC
TCTATGAGTAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATGAAAGACGAATTTTTGGAATATTGTGCCAAAAACCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.992	100	0.97
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414