Detailed information NTG0439224

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HG565_RS01640
• Genome accession: NZ_CP051502
• Coordinates: 334535..335335 (+)
• Length: 266 a.a.
• NCBI ID: WP_202169703.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain PUNO-001
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 329535..340335

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG565_RS01605 (HG565_01595)	pseH	330040..330582 (+)	543	WP_202169698.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HG565_RS01610 (HG565_01600)	-	330515..331453 (-)	939	WP_202169699.1	tetraacyldisaccharide 4'-kinase	-
HG565_RS01615 (HG565_01605)	-	331450..332232 (-)	783	WP_202169700.1	NAD+ synthase	-
HG565_RS01625 (HG565_01615)	ilvC	332481..333473 (+)	993	WP_202169701.1	ketol-acid reductoisomerase	-
HG565_RS01630 (HG565_01620)	minD	333492..334298 (+)	807	WP_202169702.1	septum site-determining protein MinD	-
HG565_RS01635 (HG565_01625)	minE	334295..334528 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
HG565_RS01640 (HG565_01630)	dprA	334535..335335 (+)	801	WP_202169703.1	DNA-processing protein DprA	Machinery gene
HG565_RS01645 (HG565_01635)	dprB	335332..335736 (+)	405	WP_202168648.1	Holliday junction resolvase RuvX	Machinery gene
HG565_RS01650 (HG565_01640)	-	335868..336662 (+)	795	WP_202169704.1	tetratricopeptide repeat protein	-
HG565_RS01655 (HG565_01645)	-	336850..337188 (+)	339	WP_202169705.1	hypothetical protein	-
HG565_RS01660 (HG565_01650)	-	337172..337732 (+)	561	WP_202169706.1	hypothetical protein	-
HG565_RS01665 (HG565_01655)	-	337743..338069 (+)	327	WP_202169707.1	lysozyme	-
HG565_RS07845	-	338153..338317 (+)	165	WP_228921320.1	lysozyme	-
HG565_RS01675 (HG565_01665)	-	338730..339105 (+)	376	Protein_323	DUF1294 domain-containing protein	-
HG565_RS01680 (HG565_01670)	-	339105..339890 (+)	786	WP_202169708.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29789.80 Da
• Isoelectric Point: 8.9028

>NTDB_id=439224 HG565_RS01640 WP_202169703.1 334535..335335(+) (dprA) [Helicobacter pylori strain PUNO-001]
MKSHFQYSVLENIPKAFDILKDPPKKLYCVGDTKLLEVPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKGFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=439224 HG565_RS01640 WP_202169703.1 334535..335335(+) (dprA) [Helicobacter pylori strain PUNO-001]
ATGAAAAGCCATTTCCAATACAGCGTGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGTGCCTTTAAAAGTAGCGATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTGGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTGGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGGTTTTATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCTCAAGCGGATTTGAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCTTAAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTGGAATATTGCGCCAAAAACCCAAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAACTTTTGGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (13-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.074	81.203	0.398