Detailed information NTG0439203

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HG566_RS01620
• Genome accession: NZ_CP051501
• Coordinates: 329158..329958 (+)
• Length: 266 a.a.
• NCBI ID: WP_000840088.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain PUNO-002
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 324158..334958

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG566_RS01585 (HG566_01590)	pseH	324653..325195 (+)	543	WP_202164851.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HG566_RS01590 (HG566_01595)	-	325128..326066 (-)	939	WP_202164852.1	tetraacyldisaccharide 4'-kinase	-
HG566_RS01595 (HG566_01600)	-	326063..326845 (-)	783	WP_202164853.1	NAD+ synthase	-
HG566_RS01605 (HG566_01610)	ilvC	327094..328086 (+)	993	WP_202164854.1	ketol-acid reductoisomerase	-
HG566_RS01610 (HG566_01615)	minD	328110..328916 (+)	807	WP_202164855.1	septum site-determining protein MinD	-
HG566_RS01615 (HG566_01620)	minE	328913..329146 (+)	234	WP_000051412.1	cell division topological specificity factor MinE	-
HG566_RS01620 (HG566_01625)	dprA	329158..329958 (+)	801	WP_000840088.1	DNA-processing protein DprA	Machinery gene
HG566_RS01625 (HG566_01630)	dprB	329955..330359 (+)	405	WP_096482564.1	Holliday junction resolvase RuvX	Machinery gene
HG566_RS07540	-	330485..330979 (+)	495	Protein_318	tetratricopeptide repeat protein	-
HG566_RS07545	-	331061..331648 (+)	588	WP_237393400.1	tetratricopeptide repeat protein	-
HG566_RS01635 (HG566_01640)	-	331837..332175 (+)	339	WP_000699912.1	hypothetical protein	-
HG566_RS01640 (HG566_01645)	-	332159..332725 (+)	567	WP_202164858.1	hypothetical protein	-
HG566_RS01645 (HG566_01650)	-	332737..333315 (+)	579	WP_237393388.1	glycoside hydrolase family protein	-
HG566_RS01650 (HG566_01655)	-	333730..334116 (+)	387	WP_202164859.1	DUF1294 domain-containing protein	-
HG566_RS01655 (HG566_01660)	-	334116..334901 (+)	786	WP_202164860.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29800.73 Da
• Isoelectric Point: 8.5925

>NTDB_id=439203 HG566_RS01620 WP_000840088.1 329158..329958(+) (dprA) [Helicobacter pylori strain PUNO-002]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=439203 HG566_RS01620 WP_000840088.1 329158..329958(+) (dprA) [Helicobacter pylori strain PUNO-002]
ATGAAAAGCAACTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGACGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCTAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCTACTAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTGAAAAGCGGC
TCTATGAGCAGTGCAAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCTTAAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTGGAGTATTGCGCCAAAAATCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.992	100	0.97
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414