Detailed information NTG0439160

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HG568_RS01650
• Genome accession: NZ_CP051499
• Coordinates: 339505..340305 (+)
• Length: 266 a.a.
• NCBI ID: WP_202167798.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain PUNO-004
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 334505..345305

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG568_RS01615 (HG568_01615)	pseH	335000..335542 (+)	543	WP_202167794.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HG568_RS01620 (HG568_01620)	-	335475..336413 (-)	939	WP_202140928.1	tetraacyldisaccharide 4'-kinase	-
HG568_RS01625 (HG568_01625)	-	336410..337192 (-)	783	WP_202167795.1	NAD+ synthase	-
HG568_RS01635 (HG568_01635)	ilvC	337441..338433 (+)	993	WP_202167796.1	ketol-acid reductoisomerase	-
HG568_RS01640 (HG568_01640)	minD	338457..339263 (+)	807	WP_202167797.1	septum site-determining protein MinD	-
HG568_RS01645 (HG568_01645)	minE	339260..339493 (+)	234	WP_001916961.1	cell division topological specificity factor MinE	-
HG568_RS01650 (HG568_01650)	dprA	339505..340305 (+)	801	WP_202167798.1	DNA-processing protein DprA	Machinery gene
HG568_RS01655 (HG568_01655)	dprB	340302..340706 (+)	405	WP_202167799.1	Holliday junction resolvase RuvX	Machinery gene
HG568_RS07670	-	340830..341516 (+)	687	Protein_323	tetratricopeptide repeat protein	-
HG568_RS07675	-	341520..342107 (+)	588	WP_237393443.1	tetratricopeptide repeat protein	-
HG568_RS01665 (HG568_01665)	-	342294..342632 (+)	339	WP_202167801.1	hypothetical protein	-
HG568_RS01670 (HG568_01670)	-	342616..343176 (+)	561	WP_202167802.1	hypothetical protein	-
HG568_RS01675 (HG568_01675)	-	343187..343525 (+)	339	WP_202167803.1	lysozyme	-
HG568_RS07680	-	343485..343766 (+)	282	WP_237393429.1	hypothetical protein	-
HG568_RS01685 (HG568_01685)	-	344193..344574 (+)	382	Protein_329	DUF1294 domain-containing protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29816.73 Da
• Isoelectric Point: 8.5925

>NTDB_id=439160 HG568_RS01650 WP_202167798.1 339505..340305(+) (dprA) [Helicobacter pylori strain PUNO-004]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDTKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIVQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=439160 HG568_RS01650 WP_202167798.1 339505..340305(+) (dprA) [Helicobacter pylori strain PUNO-004]
ATGAAAAGCAATTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGATCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACAAAGCTTTTAGATGCGCCTTTAAAAGTGGCTATCATCGGCACGAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAATCATAAAGTGATCCAAGAAATCGTGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTCATTATCCCCCAAGCGGATTTGAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAGAAATACCAAAAACCCTTATTTGTTTTACCCCAACGCCTGAATGAAAGCGACGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATGAAAGACGAATTTTTGGAATATTGCGCCAAAAACCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAACTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.992	100	0.97
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.537	81.203	0.402