Detailed information NTG0439119

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HG570_RS01615
• Genome accession: NZ_CP051497
• Coordinates: 335066..335866 (+)
• Length: 266 a.a.
• NCBI ID: WP_199496197.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain PUNO-007
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 330066..340866

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG570_RS01580 (HG570_01580)	pseH	330568..331110 (+)	543	WP_202141987.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HG570_RS01585 (HG570_01585)	-	331043..331981 (-)	939	WP_202141988.1	tetraacyldisaccharide 4'-kinase	-
HG570_RS01590 (HG570_01590)	-	331978..332760 (-)	783	WP_202141990.1	NAD+ synthase	-
HG570_RS01600 (HG570_01600)	ilvC	333007..333999 (+)	993	WP_202141992.1	ketol-acid reductoisomerase	-
HG570_RS01605 (HG570_01605)	minD	334018..334824 (+)	807	WP_001019101.1	septum site-determining protein MinD	-
HG570_RS01610 (HG570_01610)	minE	334821..335054 (+)	234	WP_000051412.1	cell division topological specificity factor MinE	-
HG570_RS01615 (HG570_01615)	dprA	335066..335866 (+)	801	WP_199496197.1	DNA-processing protein DprA	Machinery gene
HG570_RS01620 (HG570_01620)	dprB	335863..336267 (+)	405	WP_202141993.1	Holliday junction resolvase RuvX	Machinery gene
HG570_RS01625 (HG570_01625)	-	336364..336966 (+)	603	WP_237393323.1	tetratricopeptide repeat protein	-
HG570_RS01630 (HG570_01630)	-	337161..337499 (+)	339	WP_202141995.1	hypothetical protein	-
HG570_RS01635 (HG570_01635)	-	337483..338049 (+)	567	WP_202141997.1	hypothetical protein	-
HG570_RS07855 (HG570_01640)	-	338471..338738 (+)	268	Protein_320	lysozyme	-
HG570_RS01645 (HG570_01645)	-	339061..339447 (+)	387	WP_202141998.1	DUF1294 domain-containing protein	-
HG570_RS01650 (HG570_01650)	-	339447..340232 (+)	786	WP_202142000.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29788.68 Da
• Isoelectric Point: 8.5925

>NTDB_id=439119 HG570_RS01615 WP_199496197.1 335066..335866(+) (dprA) [Helicobacter pylori strain PUNO-007]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDTKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=439119 HG570_RS01615 WP_199496197.1 335066..335866(+) (dprA) [Helicobacter pylori strain PUNO-007]
ATGAAAAGCAACTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACAAAGCTTTTAGACGCACCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCACAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGT
TCTATGAGTAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTAAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTGGAATATTGCGCCAAAAACCCAAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	97.368	100	0.974
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.537	81.203	0.402