Detailed information NTG0439096

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HG571_RS01615
• Genome accession: NZ_CP051496
• Coordinates: 334047..334847 (+)
• Length: 266 a.a.
• NCBI ID: WP_000840088.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain PUNO-008
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 329047..339847

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG571_RS01580 (HG571_01590)	pseH	329542..330084 (+)	543	WP_202140927.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HG571_RS01585 (HG571_01595)	-	330017..330955 (-)	939	WP_202140928.1	tetraacyldisaccharide 4'-kinase	-
HG571_RS01590 (HG571_01600)	-	330952..331734 (-)	783	WP_202140929.1	NAD+ synthase	-
HG571_RS01600 (HG571_01610)	ilvC	331983..332975 (+)	993	WP_202140930.1	ketol-acid reductoisomerase	-
HG571_RS01605 (HG571_01615)	minD	332999..333805 (+)	807	WP_015643076.1	septum site-determining protein MinD	-
HG571_RS01610 (HG571_01620)	minE	333802..334035 (+)	234	WP_000051412.1	cell division topological specificity factor MinE	-
HG571_RS01615 (HG571_01625)	dprA	334047..334847 (+)	801	WP_000840088.1	DNA-processing protein DprA	Machinery gene
HG571_RS01620 (HG571_01630)	dprB	334844..335248 (+)	405	WP_202140931.1	Holliday junction resolvase RuvX	Machinery gene
HG571_RS01625 (HG571_01635)	-	335378..336529 (+)	1152	WP_202140932.1	tetratricopeptide repeat protein	-
HG571_RS01630 (HG571_01640)	-	336718..337056 (+)	339	WP_089482812.1	hypothetical protein	-
HG571_RS01635 (HG571_01645)	-	337040..337606 (+)	567	WP_202140933.1	hypothetical protein	-
HG571_RS01640 (HG571_01650)	-	337618..337950 (+)	333	WP_202140934.1	lysozyme	-
HG571_RS07925	-	337974..338198 (+)	225	WP_237393003.1	hypothetical protein	-
HG571_RS01650 (HG571_01660)	-	338628..339008 (+)	381	Protein_323	DUF1294 domain-containing protein	-
HG571_RS01655 (HG571_01665)	-	339008..339793 (+)	786	WP_202140935.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29800.73 Da
• Isoelectric Point: 8.5925

>NTDB_id=439096 HG571_RS01615 WP_000840088.1 334047..334847(+) (dprA) [Helicobacter pylori strain PUNO-008]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=439096 HG571_RS01615 WP_000840088.1 334047..334847(+) (dprA) [Helicobacter pylori strain PUNO-008]
ATGAAAAGCAATTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGACGCGCCTTTAAAAGTGGCCATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAGCACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTACCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATGAAAGACGAATTTTTGGAATATTGCGCCAAAAACCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTGGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.992	100	0.97
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414