Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   HC660_RS15965 Genome accession   NZ_CP051464
Coordinates   3039584..3040228 (-) Length   214 a.a.
NCBI ID   WP_168748642.1    Uniprot ID   A0AAP3CWI3
Organism   Bacillus mojavensis strain UCMB5075     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3034584..3045228
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HC660_RS15930 (HC660_30480) - 3035777..3036208 (+) 432 WP_024122673.1 Na(+)/H(+) antiporter subunit B -
  HC660_RS15935 (HC660_30490) - 3036208..3036549 (+) 342 WP_010331684.1 Na(+)/H(+) antiporter subunit C -
  HC660_RS15940 (HC660_30500) - 3036542..3038023 (+) 1482 WP_168748641.1 Na+/H+ antiporter subunit D -
  HC660_RS15945 (HC660_30510) - 3038029..3038505 (+) 477 WP_010331686.1 Na+/H+ antiporter subunit E -
  HC660_RS15950 (HC660_30520) - 3038505..3038789 (+) 285 WP_024122677.1 Na(+)/H(+) antiporter subunit F1 -
  HC660_RS15955 (HC660_30530) mnhG 3038773..3039147 (+) 375 WP_010331688.1 monovalent cation/H(+) antiporter subunit G -
  HC660_RS15960 (HC660_30540) - 3039186..3039566 (-) 381 WP_106022011.1 hotdog fold thioesterase -
  HC660_RS15965 (HC660_30550) comA 3039584..3040228 (-) 645 WP_168748642.1 two-component system response regulator ComA Regulator
  HC660_RS15970 comP 3040309..3042623 (-) 2315 Protein_3098 two-component system sensor histidine kinase ComP -
  HC660_RS15975 (HC660_30570) comX 3042639..3042806 (-) 168 WP_044158946.1 competence pheromone ComX Regulator
  HC660_RS15980 (HC660_30580) comQ 3042790..3043692 (-) 903 WP_168749496.1 polyprenyl synthetase family protein Regulator
  HC660_RS15985 (HC660_30590) degQ 3043877..3044017 (-) 141 WP_010331694.1 degradation enzyme regulation protein DegQ Regulator
  HC660_RS15990 - 3044478..3044846 (+) 369 WP_010331695.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24172.52 Da        Isoelectric Point: 4.6801

>NTDB_id=438508 HC660_RS15965 WP_168748642.1 3039584..3040228(-) (comA) [Bacillus mojavensis strain UCMB5075]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIRQHDFSSYDLILMDLNLGGDVNGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFTYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=438508 HC660_RS15965 WP_168748642.1 3039584..3040228(-) (comA) [Bacillus mojavensis strain UCMB5075]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATTT
GTCTGTTGATTGTCTCAGTCCTGAACCCAGCGAACAGTTCATACGCCAGCATGATTTCTCATCATATGATCTCATTTTAA
TGGATTTGAACTTAGGCGGCGATGTCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTATATACCGGTTATGAGGTCGAGGATTATTTTGAGGAAGCGATTCGTGCGGGTCTGCACGGCGCCATCAGCAAAAC
CGAATCAAAGGAAAAGATCACCCAATACATATATCACGTGCTCAACGGAGAAATTTTAGTCGATTTCACTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCCCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCAAGAGAATGCCTG
ATTCTTCAAGAAGTTGAAAAAGGTTTTACCAACCAAGAAATTGCAGATGCGCTTCATTTAAGCAAGCGGTCCATTGAATA
CAGCCTGACGTCGATTTTCAACAAGCTTAATGTCGGTTCCCGGACGGAAGCGGTGTTGATTGCAAAATCAGACGGTGTGC
TTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

98.598

100

0.986