Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   HC660_RS15980 Genome accession   NZ_CP051464
Coordinates   3042790..3043692 (-) Length   300 a.a.
NCBI ID   WP_168749496.1    Uniprot ID   -
Organism   Bacillus mojavensis strain UCMB5075     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3037790..3048692
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HC660_RS15945 (HC660_30510) - 3038029..3038505 (+) 477 WP_010331686.1 Na+/H+ antiporter subunit E -
  HC660_RS15950 (HC660_30520) - 3038505..3038789 (+) 285 WP_024122677.1 Na(+)/H(+) antiporter subunit F1 -
  HC660_RS15955 (HC660_30530) mnhG 3038773..3039147 (+) 375 WP_010331688.1 monovalent cation/H(+) antiporter subunit G -
  HC660_RS15960 (HC660_30540) - 3039186..3039566 (-) 381 WP_106022011.1 hotdog fold thioesterase -
  HC660_RS15965 (HC660_30550) comA 3039584..3040228 (-) 645 WP_168748642.1 two-component system response regulator ComA Regulator
  HC660_RS15970 comP 3040309..3042623 (-) 2315 Protein_3098 two-component system sensor histidine kinase ComP -
  HC660_RS15975 (HC660_30570) comX 3042639..3042806 (-) 168 WP_044158946.1 competence pheromone ComX Regulator
  HC660_RS15980 (HC660_30580) comQ 3042790..3043692 (-) 903 WP_168749496.1 polyprenyl synthetase family protein Regulator
  HC660_RS15985 (HC660_30590) degQ 3043877..3044017 (-) 141 WP_010331694.1 degradation enzyme regulation protein DegQ Regulator
  HC660_RS15990 - 3044478..3044846 (+) 369 WP_010331695.1 hypothetical protein -
  HC660_RS15995 (HC660_30600) - 3044822..3046051 (-) 1230 WP_168748643.1 EAL and HDOD domain-containing protein -
  HC660_RS16000 (HC660_30610) - 3046187..3047656 (-) 1470 WP_010331697.1 nicotinate phosphoribosyltransferase -
  HC660_RS16005 (HC660_30620) - 3047672..3048223 (-) 552 WP_168748644.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 300 a.a.        Molecular weight: 34515.82 Da        Isoelectric Point: 6.6111

>NTDB_id=438510 HC660_RS15980 WP_168749496.1 3042790..3043692(-) (comQ) [Bacillus mojavensis strain UCMB5075]
MKEIIKQYSFNEDLTQLLYSFIDSKEIFSFAESAILHYVVFGGKNLEVATKLGAGIEILILSSDIMDDLEDEDNHQALWM
KINRSESLNAALFLYTIGLTSIHSMDINPLIFKYVLKYVKEAMQGQHDDITNKSKTEDECLEVIRLKCGSLIALANVTGV
ILATDEYNEIVERYSYYKGIVAQISGDYHVLFSGNRSDIEKNKQTLIYLYLKRVFNEASKELLYLFSNKDLYHKALLNKD
KFAEKLIKAGVTQYVSVLLQLYKQKCISAIEQLNLYKEKKDLIKKHLLNYKKGDENARPN

Nucleotide


Download         Length: 903 bp        

>NTDB_id=438510 HC660_RS15980 WP_168749496.1 3042790..3043692(-) (comQ) [Bacillus mojavensis strain UCMB5075]
ATGAAAGAAATTATAAAGCAATACAGTTTTAACGAAGATTTGACACAACTTCTTTACTCATTTATCGATTCTAAAGAAAT
ATTCTCCTTTGCTGAATCTGCAATTTTACATTATGTGGTTTTTGGAGGGAAGAATTTAGAGGTTGCAACAAAGCTCGGTG
CAGGAATAGAAATTCTTATTCTTTCATCAGATATCATGGATGATCTTGAAGATGAAGATAATCATCAGGCTTTATGGATG
AAAATTAATCGATCAGAATCCTTAAATGCTGCGCTTTTCTTATATACAATAGGATTAACAAGTATTCATTCCATGGATAT
CAATCCTTTGATTTTTAAATATGTTTTAAAATATGTGAAAGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CCAAAACAGAGGATGAGTGTTTAGAGGTAATTAGATTAAAATGTGGGAGCTTGATAGCATTAGCTAATGTAACAGGTGTT
ATATTAGCTACAGATGAATATAATGAAATAGTCGAAAGATACTCCTATTATAAGGGAATTGTAGCCCAAATTTCTGGAGA
CTATCATGTTCTTTTTTCTGGAAATCGCAGTGATATTGAAAAAAATAAACAAACATTGATTTATTTATATCTTAAACGTG
TATTTAATGAAGCTTCGAAAGAATTATTGTACTTATTTTCAAATAAGGATTTGTATCATAAGGCGTTATTAAATAAGGAT
AAATTCGCAGAAAAGTTAATTAAGGCAGGAGTTACCCAATACGTTTCAGTATTATTGCAGCTATATAAGCAAAAATGTAT
TTCTGCTATAGAACAATTAAATTTATATAAAGAGAAAAAAGATTTGATAAAGAAACACTTATTAAATTATAAAAAGGGTG
ATGAAAATGCAAGACCTAATTAA

Domains


Predicted by InterproScan.

(44-227)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

82.609

99.667

0.823