Detailed information NTG0043845

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: B657_RS14650
• Genome accession: NC_018520
• Coordinates: 2767604..2768209 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis QB928
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2762604..2773209

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B657_RS14620 (B657_27690)	-	2763417..2763806 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
B657_RS14625 (B657_27700)	yajC	2763863..2764129 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
B657_RS14630 (B657_27710)	tgt	2764166..2765311 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
B657_RS14635 (B657_27720)	queA	2765338..2766366 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
B657_RS14640 (B657_27729)	yrzS	2766396..2766596 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
B657_RS14645 (B657_27730)	ruvB	2766589..2767593 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
B657_RS14650 (B657_27740)	ruvA	2767604..2768209 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
B657_RS14655 (B657_27750)	bofC	2768348..2768860 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
B657_RS14660 (B657_27760)	csbX	2768908..2770215 (-)	1308	WP_003246197.1	MFS transporter	-
B657_RS14665 (B657_27770)	iolG	2770286..2771311 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
B657_RS14670 (B657_27785)	yrzF	2771549..2772196 (+)	648	WP_003246159.1	phosphotransferase	-
B657_RS22535 (B657_27787)	-	2772242..2772364 (-)	123	WP_003229707.1	hypothetical protein	-
B657_RS22540	yrzH	2772449..2772739 (+)	291	WP_003246047.1	DUF5412 family protein	-
B657_RS14685 (B657_27809)	-	2772746..2772886 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=43845 B657_RS14650 WP_003229717.1 2767604..2768209(-) (ruvA) [Bacillus subtilis QB928]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=43845 B657_RS14650 WP_003229717.1 2767604..2768209(-) (ruvA) [Bacillus subtilis QB928]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408