Detailed information NTG0438382

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: HC661_RS02150
• Genome accession: NZ_CP051463
• Coordinates: 424993..426141 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain UCMB5140
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 419993..431141

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HC661_RS02130 (HC661_04180)	-	420391..421074 (-)	684	WP_015416808.1	ABC transporter ATP-binding protein	-
HC661_RS02135 (HC661_04190)	-	421089..422525 (-)	1437	WP_015416809.1	ABC transporter permease	-
HC661_RS02140 (HC661_04200)	-	422737..423420 (+)	684	WP_007410267.1	response regulator transcription factor	-
HC661_RS02145 (HC661_04210)	-	423407..424840 (+)	1434	WP_015416810.1	HAMP domain-containing sensor histidine kinase	-
HC661_RS02150 (HC661_04220)	rapC	424993..426141 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
HC661_RS02155 (HC661_04230)	phrC	426125..426244 (+)	120	WP_031378677.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
HC661_RS02160	-	426393..426488 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
HC661_RS02165 (HC661_04240)	-	426583..427947 (-)	1365	WP_015416811.1	aspartate kinase	-
HC661_RS02170 (HC661_04250)	ceuB	428361..429314 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
HC661_RS02175 (HC661_04260)	-	429304..430251 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
HC661_RS02180 (HC661_04270)	-	430245..431003 (+)	759	WP_015416812.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=438382 HC661_RS02150 WP_007410270.1 424993..426141(+) (rapC) [Bacillus velezensis strain UCMB5140]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=438382 HC661_RS02150 WP_007410270.1 424993..426141(+) (rapC) [Bacillus velezensis strain UCMB5140]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGATTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568