Detailed information NTG0438269

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HGK49_RS01715
• Genome accession: NZ_CP051434
• Coordinates: 348272..349072 (+)
• Length: 266 a.a.
• NCBI ID: WP_202133080.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain ASHA-004
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 343272..354072

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HGK49_RS01680 (HGK49_01685)	pseH	343774..344316 (+)	543	WP_202133075.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HGK49_RS01685 (HGK49_01690)	-	344249..345187 (-)	939	WP_202133076.1	tetraacyldisaccharide 4'-kinase	-
HGK49_RS01690 (HGK49_01695)	-	345184..345966 (-)	783	WP_202133077.1	NAD+ synthase	-
HGK49_RS01700 (HGK49_01705)	ilvC	346213..347205 (+)	993	WP_202133078.1	ketol-acid reductoisomerase	-
HGK49_RS01705 (HGK49_01710)	minD	347224..348030 (+)	807	WP_202133079.1	septum site-determining protein MinD	-
HGK49_RS01710 (HGK49_01715)	minE	348027..348260 (+)	234	WP_000051411.1	cell division topological specificity factor MinE	-
HGK49_RS01715 (HGK49_01720)	dprA	348272..349072 (+)	801	WP_202133080.1	DNA-processing protein DprA	Machinery gene
HGK49_RS01720 (HGK49_01725)	dprB	349069..349473 (+)	405	WP_202133081.1	Holliday junction resolvase RuvX	Machinery gene
HGK49_RS01725 (HGK49_01730)	-	349641..349964 (+)	324	WP_202133082.1	tetratricopeptide repeat protein	-
HGK49_RS01730 (HGK49_01735)	-	350154..350492 (+)	339	WP_202133083.1	hypothetical protein	-
HGK49_RS01735 (HGK49_01740)	-	350476..351042 (+)	567	WP_202133084.1	hypothetical protein	-
HGK49_RS08115 (HGK49_01745)	-	351054..351445 (+)	392	Protein_341	lysozyme	-
HGK49_RS01745 (HGK49_01750)	-	351466..351684 (+)	219	WP_237388910.1	lysozyme	-
HGK49_RS01750 (HGK49_01755)	-	352032..352418 (+)	387	WP_202133397.1	DUF1294 domain-containing protein	-
HGK49_RS01755 (HGK49_01760)	-	352418..353203 (+)	786	WP_202133085.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29816.72 Da
• Isoelectric Point: 8.5925

>NTDB_id=438269 HGK49_RS01715 WP_202133080.1 348272..349072(+) (dprA) [Helicobacter pylori strain ASHA-004]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLAREFAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=438269 HGK49_RS01715 WP_202133080.1 348272..349072(+) (dprA) [Helicobacter pylori strain ASHA-004]
ATGAAAAGCAACTTCCAATACAGCGCACTAGAGAACATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGACGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGTTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTAGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTCAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCAAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41