Detailed information    

experimental Experimentally validated

Overview


Name   adcC   Type   Unclear
Locus tag   SPR_RS10080 Genome accession   NC_003098
Coordinates   1968412..1969116 (-) Length   234 a.a.
NCBI ID   WP_001269474.1    Uniprot ID   A0A0B7LF31
Organism   Streptococcus pneumoniae R6     
Function   require for competence; Zn permease   
Unclear

Function


The adcCBA putative operon of Streptococcus pneumoniae, an important human pathogen, was identified in a search for transformation-deficient mutants. The addition of Zn also restored near-normal spontaneous transformation of adc mutant cells in standard transformation medium. The removal of Mn from standard transformation medium also resulted in transformation deficiency of psaA mutant cells.


Genomic Context


Location: 1963412..1974116
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPR_RS10065 (spr1974) - 1964196..1964969 (+) 774 WP_000588546.1 DeoR/GlpR family DNA-binding transcription regulator -
  SPR_RS10070 (spr1975) adcA 1966098..1967603 (-) 1506 WP_000724074.1 zinc ABC transporter substrate-binding lipoprotein AdcA Unclear
  SPR_RS10075 (spr1976) adcB 1967613..1968419 (-) 807 WP_000950018.1 metal ABC transporter permease Unclear
  SPR_RS10080 (spr1977) adcC 1968412..1969116 (-) 705 WP_001269474.1 metal ABC transporter ATP-binding protein Unclear
  SPR_RS10085 (spr1978) adcR 1969116..1969556 (-) 441 WP_001249319.1 zinc-dependent transcriptional regulator AdcR -
  SPR_RS10090 (spr1979) dltD 1969711..1970979 (-) 1269 WP_000919861.1 D-alanyl-lipoteichoic acid biosynthesis protein DltD -
  SPR_RS10095 (spr1980) dltC 1970972..1971211 (-) 240 WP_000351967.1 D-alanine--poly(phosphoribitol) ligase subunit DltC -
  SPR_RS10100 (spr1981) dltB 1971225..1972469 (-) 1245 WP_000969752.1 D-alanyl-lipoteichoic acid biosynthesis protein DltB -
  SPR_RS10105 (spr1982) dltA 1972466..1973932 (-) 1467 WP_010976676.1 D-alanine--poly(phosphoribitol) ligase subunit DltA -

Sequence


Protein


Download         Length: 234 a.a.        Molecular weight: 26541.95 Da        Isoelectric Point: 7.3632

>NTDB_id=438 SPR_RS10080 WP_001269474.1 1968412..1969116(-) (adcC) [Streptococcus pneumoniae R6]
MRYITVEDLSFYYDKEPVLEHINYCVDSGEFVTLTGENGAAKTTLIKASLGILQPRIGKVAISKTNTQGKKLRIAYLPQQ
IASFNAGFPSTVYEFVKSGRYPRKGWFRRLNAHDEEHIKASLDSVGMWEHRDKRLGSLSGGQKQRAVIARMFASDPDVFI
LDEPTTGMDAGSKNEFYELMHHSAHHHGKAVLMITHDPEEVKDYADRNIHLVRNQDSPWRCFNVHENGQEVGHA

Nucleotide


Download         Length: 705 bp        

>NTDB_id=438 SPR_RS10080 WP_001269474.1 1968412..1969116(-) (adcC) [Streptococcus pneumoniae R6]
ATGAGATATATTACGGTAGAGGATTTGTCCTTCTATTATGATAAGGAGCCTGTTCTTGAACATATCAATTATTGTGTTGA
TAGTGGGGAATTTGTTACCTTGACTGGGGAAAATGGAGCGGCTAAGACGACGCTCATCAAGGCTAGTCTTGGAATTCTGC
AACCACGCATTGGAAAGGTGGCTATTTCAAAGACAAATACGCAAGGTAAGAAATTGAGAATAGCCTATCTTCCTCAACAA
ATTGCCAGTTTTAATGCTGGTTTTCCAAGTACGGTCTATGAATTTGTCAAGTCGGGTCGCTATCCGAGAAAAGGCTGGTT
CCGTCGTTTGAATGCTCATGATGAGGAGCATATCAAGGCTAGTCTGGACTCAGTTGGCATGTGGGAACATCGAGACAAAC
GCTTGGGGTCTCTATCTGGGGGACAAAAGCAGCGAGCGGTAATTGCGCGTATGTTTGCTTCTGACCCTGATGTGTTTATC
CTAGACGAGCCGACAACGGGGATGGATGCAGGAAGTAAAAATGAATTTTACGAACTCATGCACCACAGCGCCCATCATCA
TGGCAAGGCTGTTTTGATGATTACCCATGACCCTGAAGAAGTTAAGGATTATGCGGATCGCAATATTCATCTAGTCCGTA
ACCAAGACTCGCCATGGCGTTGTTTCAATGTTCATGAGAATGGCCAGGAGGTGGGCCATGCTTAG

Domains


Predicted by InterproScan.

(19-165)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7LF31

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  adcC Streptococcus gordonii str. Challis substr. CH1

91.102

100

0.919


Multiple sequence alignment    



References


[1] A Dintilhac et al. (1997) Competence and virulence of Streptococcus pneumoniae: Adc and PsaA mutants exhibit a requirement for Zn and Mn resulting from inactivation of putative ABC metal permeases. Molecular Microbiology 25(4):727-39. [PMID: 9379902]