Detailed information NTG0437264

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HGI45_RS01655
• Genome accession: NZ_CP051292
• Coordinates: 350178..350978 (+)
• Length: 266 a.a.
• NCBI ID: WP_202137292.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain ASHA-003
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 345178..355978

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HGI45_RS01620 (HGI45_01620)	pseH	345678..346220 (+)	543	WP_202137288.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HGI45_RS01625 (HGI45_01625)	-	346153..347091 (-)	939	WP_202137289.1	tetraacyldisaccharide 4'-kinase	-
HGI45_RS01630 (HGI45_01630)	-	347088..347870 (-)	783	WP_202137290.1	NAD+ synthase	-
HGI45_RS01640 (HGI45_01640)	ilvC	348119..349111 (+)	993	WP_202137291.1	ketol-acid reductoisomerase	-
HGI45_RS01645 (HGI45_01645)	minD	349135..349941 (+)	807	WP_001019048.1	septum site-determining protein MinD	-
HGI45_RS01650 (HGI45_01650)	minE	349938..350171 (+)	234	WP_077656567.1	cell division topological specificity factor MinE	-
HGI45_RS01655 (HGI45_01655)	dprA	350178..350978 (+)	801	WP_202137292.1	DNA-processing protein DprA	Machinery gene
HGI45_RS01660 (HGI45_01660)	dprB	350975..351379 (+)	405	WP_001922949.1	Holliday junction resolvase RuvX	Machinery gene
HGI45_RS01665 (HGI45_01665)	-	351613..352080 (+)	468	WP_202137293.1	tetratricopeptide repeat protein	-
HGI45_RS01670 (HGI45_01670)	-	352267..352605 (+)	339	WP_000699891.1	hypothetical protein	-
HGI45_RS01675 (HGI45_01675)	-	352589..353149 (+)	561	WP_202137294.1	hypothetical protein	-
HGI45_RS01680 (HGI45_01680)	-	353326..354207 (-)	882	WP_202137295.1	RluA family pseudouridine synthase	-
HGI45_RS01685 (HGI45_01685)	recJ	354207..355757 (-)	1551	WP_202137296.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29839.72 Da
• Isoelectric Point: 7.7772

>NTDB_id=437264 HGI45_RS01655 WP_202137292.1 350178..350978(+) (dprA) [Helicobacter pylori strain ASHA-003]
MKSNFQYSVLENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPTTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLQSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCTKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=437264 HGI45_RS01655 WP_202137292.1 350178..350978(+) (dprA) [Helicobacter pylori strain ASHA-003]
ATGAAAAGTAATTTCCAATACAGCGTGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAACAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
TAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCCTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCATTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTAGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTACAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTGTTTGTTTTACCCCAACGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCACCAAAAACCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAACTTTTAGAATACGAGCTGTTAGGTAAGATCAAGCGTATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (13-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.865	100	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41