Detailed information NTG0437199

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: IMZ18_RS04430
• Genome accession: NZ_CP063151
• Coordinates: 843606..844211 (+)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis subsp. subtilis strain CMIN-4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 838606..849211

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IMZ18_RS04395 (IMZ18_04395)	-	838773..838913 (-)	141	WP_004398683.1	hypothetical protein	-
IMZ18_RS04400 (IMZ18_04400)	-	838920..839288 (-)	369	WP_186437837.1	DUF5412 family protein	-
IMZ18_RS22400	-	839292..839366 (-)	75	Protein_858	hypothetical protein	-
IMZ18_RS04405 (IMZ18_04405)	-	839451..839573 (+)	123	WP_003229707.1	hypothetical protein	-
IMZ18_RS04410 (IMZ18_04410)	yrzF	839619..840266 (-)	648	WP_014480441.1	phosphotransferase	-
IMZ18_RS04415 (IMZ18_04415)	iolG	840504..841529 (+)	1026	WP_014480440.1	inositol 2-dehydrogenase	-
IMZ18_RS04420 (IMZ18_04420)	csbX	841600..842907 (+)	1308	WP_014480439.1	MFS transporter	-
IMZ18_RS04425 (IMZ18_04425)	bofC	842955..843467 (+)	513	WP_014480438.1	sporulation cell-cell signaling protein BofC	-
IMZ18_RS04430 (IMZ18_04430)	ruvA	843606..844211 (+)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
IMZ18_RS04435 (IMZ18_04435)	ruvB	844222..845226 (+)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
IMZ18_RS04440 (IMZ18_04440)	yrzS	845219..845419 (+)	201	WP_003222669.1	DUF2905 domain-containing protein	-
IMZ18_RS04445 (IMZ18_04445)	queA	845449..846477 (+)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
IMZ18_RS04450 (IMZ18_04450)	tgt	846504..847649 (+)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
IMZ18_RS04455 (IMZ18_04455)	yajC	847686..847951 (+)	266	Protein_869	preprotein translocase subunit YajC	-
IMZ18_RS04460 (IMZ18_04460)	-	848008..848397 (-)	390	WP_014477528.1	TIGR04086 family membrane protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=437199 IMZ18_RS04430 WP_003229717.1 843606..844211(+) (ruvA) [Bacillus subtilis subsp. subtilis strain CMIN-4]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=437199 IMZ18_RS04430 WP_003229717.1 843606..844211(+) (ruvA) [Bacillus subtilis subsp. subtilis strain CMIN-4]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408