Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   HEQ83_RS14580 Genome accession   NZ_CP051011
Coordinates   2992491..2992631 (-) Length   46 a.a.
NCBI ID   WP_003152043.1    Uniprot ID   A3KLB4
Organism   Bacillus velezensis strain BY6     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2987491..2997631
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HEQ83_RS14555 - 2987797..2988180 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  HEQ83_RS14560 comA 2988202..2988846 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  HEQ83_RS14565 comP 2988927..2991221 (-) 2295 WP_165625758.1 sensor histidine kinase Regulator
  HEQ83_RS14575 comQ 2991374..2992306 (-) 933 WP_025650217.1 class 1 isoprenoid biosynthesis enzyme Regulator
  HEQ83_RS14580 degQ 2992491..2992631 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  HEQ83_RS14585 - 2993097..2993438 (+) 342 WP_003152040.1 hypothetical protein -
  HEQ83_RS14590 - 2993445..2994665 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -
  HEQ83_RS14595 - 2994795..2996261 (-) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -
  HEQ83_RS14600 - 2996279..2996830 (-) 552 WP_003152033.1 cysteine hydrolase family protein -
  HEQ83_RS14605 - 2996927..2997325 (-) 399 WP_003152031.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5518.30 Da        Isoelectric Point: 4.9432

>NTDB_id=436032 HEQ83_RS14580 WP_003152043.1 2992491..2992631(-) (degQ) [Bacillus velezensis strain BY6]
MENKLEEVKQLLFRLENDIRETTDSLRNINKSIDQLDKFSYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=436032 HEQ83_RS14580 WP_003152043.1 2992491..2992631(-) (degQ) [Bacillus velezensis strain BY6]
GTGGAAAACAAATTAGAAGAAGTAAAGCAATTATTATTCCGACTTGAAAATGATATCAGAGAAACAACCGACTCATTACG
AAACATTAACAAAAGCATTGATCAGCTCGATAAATTCTCATATGCAATGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

89.13

100

0.891