Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   HEQ83_RS14575 Genome accession   NZ_CP051011
Coordinates   2991374..2992306 (-) Length   310 a.a.
NCBI ID   WP_025650217.1    Uniprot ID   -
Organism   Bacillus velezensis strain BY6     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 2986374..2997306
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HEQ83_RS14540 - 2986639..2987115 (+) 477 WP_003152059.1 Na+/H+ antiporter subunit E -
  HEQ83_RS14545 - 2987115..2987399 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  HEQ83_RS14550 mnhG 2987383..2987757 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  HEQ83_RS14555 - 2987797..2988180 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  HEQ83_RS14560 comA 2988202..2988846 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  HEQ83_RS14565 comP 2988927..2991221 (-) 2295 WP_165625758.1 sensor histidine kinase Regulator
  HEQ83_RS14575 comQ 2991374..2992306 (-) 933 WP_025650217.1 class 1 isoprenoid biosynthesis enzyme Regulator
  HEQ83_RS14580 degQ 2992491..2992631 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  HEQ83_RS14585 - 2993097..2993438 (+) 342 WP_003152040.1 hypothetical protein -
  HEQ83_RS14590 - 2993445..2994665 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -
  HEQ83_RS14595 - 2994795..2996261 (-) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -
  HEQ83_RS14600 - 2996279..2996830 (-) 552 WP_003152033.1 cysteine hydrolase family protein -

Sequence

Protein


Download         Length: 310 a.a.        Molecular weight: 35663.80 Da        Isoelectric Point: 5.4532

>NTDB_id=436031 HEQ83_RS14575 WP_025650217.1 2991374..2992306(-) (comQ) [Bacillus velezensis strain BY6]
MKSIIERNIFNEHLMQLLLRFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLTSDIIDDLEDEDNRDAPWM
KIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPETEDECLEVIKLKCGSLFALANVTGT
LLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQELLRIFSDQKLYSQLRLNKK
EFIQKLYDSGASQYVSVLYQLYMHKCGTEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEFNKLFFELS

Nucleotide


Download         Length: 933 bp        

>NTDB_id=436031 HEQ83_RS14575 WP_025650217.1 2991374..2992306(-) (comQ) [Bacillus velezensis strain BY6]
ATGAAGAGTATAATAGAGCGGAACATATTTAATGAACATCTAATGCAGCTCCTTCTTCGTTTTATTGAACCAAAAAAAAA
TTTTTCTCTAGCTGAATCAGCTGTTTTGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTG
CCGCTATTGAAATTCTTACACTTACTTCCGATATAATTGATGACCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATG
AAGATAGATCGTTCACTAGCATTAAGTGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTAC
GAATCCTTTAGTGATTAAGTATGTATTAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAAC
CAGAGACAGAAGATGAATGTTTAGAGGTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACG
CTTTTAGCAACTGGAGAATTCAATAAGTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGTGA
TTATCATGCTATTTTTAAGGATAATACTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCT
TGTTTAATAAGTCTTCTCAAGAATTGCTTCGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAA
GAGTTTATTCAAAAGCTGTATGATTCTGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGG
AACTGAAGTTGAAAATTTAAATTTAGATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATA
AGAAGGATGATGAAGATGCAGAATTTAATAAATTATTTTTTGAATTATCCTGA

Domains

Predicted by InterproScan.

Polyprenyl synthetase (polyprenyl_synt)

(41-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

61.246

93.226

0.571