Detailed information NTG0043585

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: SMUGS5_RS09755
• Genome accession: NC_018089
• Coordinates: 2013163..2014254 (+)
• Length: 363 a.a.
• NCBI ID: WP_002262456.1
• Uniprot ID: Q8DRR3
• Organism: Streptococcus mutans GS-5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2008163..2019254

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMUGS5_RS09730 (SMUGS5_09675)	pgsA	2008571..2009113 (-)	543	WP_002262451.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
SMUGS5_RS09735 (SMUGS5_09680)	-	2009125..2010102 (-)	978	WP_002270375.1	helix-turn-helix domain-containing protein	-
SMUGS5_RS09740 (SMUGS5_09685)	yfmH	2010175..2011467 (-)	1293	WP_014835075.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
SMUGS5_RS09745 (SMUGS5_09690)	yfmF	2011469..2012716 (-)	1248	WP_002267086.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
SMUGS5_RS09750 (SMUGS5_09695)	yaaA	2012795..2013160 (+)	366	WP_002267087.1	S4 domain-containing protein YaaA	-
SMUGS5_RS09755 (SMUGS5_09700)	recF	2013163..2014254 (+)	1092	WP_002262456.1	DNA replication/repair protein RecF	Machinery gene
SMUGS5_RS09760 (SMUGS5_09705)	guaB	2014417..2015898 (-)	1482	WP_002262457.1	IMP dehydrogenase	-
SMUGS5_RS09765 (SMUGS5_09710)	trpS	2016055..2017077 (-)	1023	WP_014835076.1	tryptophan--tRNA ligase	-
SMUGS5_RS09770 (SMUGS5_09715)	-	2017510..2019129 (+)	1620	WP_002266410.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 363 a.a.
• Molecular weight: 42003.21 Da
• Isoelectric Point: 9.8334

>NTDB_id=43585 SMUGS5_RS09755 WP_002262456.1 2013163..2014254(+) (recF) [Streptococcus mutans GS-5]
MWIEKINLKHYRNYTAIESEFSQSLNVFVGQNAQGKTNFLEAIYFLSLTRSHRTRSDKELIQFGQKELNVSGLLNRVNGK
IPLEINLSNKGRTTKINYLKQPKLSDYIGTMTVVLFAPEDLQLIKGSPSLRRKFIDIDLGQIKPIYLSDLSNYNHVLKQR
NAYLKSEKKVDTDFLFVLDEQLVDYGSKVIEHRLDFIQNLTKEADKYHFSISNQQEHLKISYLSSVKFDHKKNIRDNFLN
LLQKNRQGDIFKKNTSVGPHRDDLAFFINQMNASFGSQGQHRSLILSLKLAEIELTKTVTGDYPILLLDDVMSELDNYRQ
IKLLEGIKDNVQTFITTTSLEHLQQLPKKLKLFTINQGKVLSE

Nucleotide

• Length: 1092 bp

>NTDB_id=43585 SMUGS5_RS09755 WP_002262456.1 2013163..2014254(+) (recF) [Streptococcus mutans GS-5]
ATGTGGATAGAAAAAATTAATTTAAAACATTATCGCAATTATACAGCCATTGAATCTGAATTTTCCCAAAGTCTTAATGT
TTTTGTGGGACAAAATGCTCAAGGAAAAACCAATTTCCTAGAGGCTATTTATTTTTTATCTTTAACCCGCAGTCATCGAA
CACGATCTGACAAAGAACTTATTCAATTTGGTCAAAAAGAATTAAATGTTTCTGGCCTTCTTAATCGTGTCAATGGCAAA
ATTCCTCTGGAAATCAACTTATCTAATAAAGGCCGAACAACAAAAATAAATTATCTCAAACAACCTAAACTTTCAGACTA
TATTGGAACAATGACTGTTGTTCTCTTTGCTCCAGAAGATCTTCAACTAATAAAAGGCTCCCCAAGTCTCAGAAGAAAGT
TTATTGACATTGATTTAGGACAAATCAAGCCTATTTACTTATCTGATTTATCAAATTATAATCATGTTCTTAAACAACGA
AACGCCTATTTAAAATCAGAGAAGAAGGTTGATACTGATTTTCTTTTCGTTCTAGATGAACAATTGGTAGATTATGGTAG
TAAGGTTATTGAGCATCGCCTTGATTTTATTCAAAATTTAACTAAAGAAGCTGATAAATATCATTTCTCTATTTCAAATC
AACAGGAACATTTAAAAATTTCCTACCTTTCTTCTGTTAAATTTGATCATAAAAAAAATATTCGTGATAACTTTTTAAAC
CTGCTACAAAAAAATCGGCAGGGTGATATTTTCAAAAAGAACACCAGTGTTGGTCCACACCGCGATGATTTAGCCTTTTT
CATCAATCAAATGAACGCTAGCTTTGGTAGTCAAGGACAACATCGCAGCCTTATTTTATCTTTAAAGCTGGCTGAGATTG
AACTTACAAAAACAGTCACTGGGGATTATCCTATTCTCTTGTTAGATGATGTCATGAGTGAACTTGATAATTATAGACAA
ATCAAACTTTTAGAAGGCATCAAAGATAATGTTCAGACCTTTATAACAACAACTAGCCTTGAACATCTTCAACAACTCCC
TAAGAAACTAAAGTTATTTACTATCAACCAAGGAAAAGTGCTATCAGAATAG

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-357)

3D structure

• AlphaFold DB: Q8DRR3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65	99.174	0.645
recF	Bacillus subtilis subsp. subtilis str. 168	43.631	100	0.444