Detailed information NTG0435795

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: FOB43_RS09875
• Genome accession: NZ_CP050992
• Coordinates: 2069890..2071203 (+)
• Length: 437 a.a.
• NCBI ID: WP_168227660.1
• Uniprot ID: -
• Organism: Chromobacterium violaceum strain FDAARGOS_635
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 2064890..2076203

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB43_RS09860 (FOB43_09860)	-	2065433..2065891 (-)	459	WP_168227659.1	GNAT family N-acetyltransferase	-
FOB43_RS09865 (FOB43_09865)	parC	2065990..2068341 (+)	2352	WP_081526169.1	DNA topoisomerase IV subunit A	-
FOB43_RS09870 (FOB43_09870)	-	2068341..2069897 (+)	1557	WP_045051037.1	ATP-binding protein	-
FOB43_RS09875 (FOB43_09875)	pilR	2069890..2071203 (+)	1314	WP_168227660.1	sigma-54 dependent transcriptional regulator	Regulator
FOB43_RS09880 (FOB43_09880)	-	2071255..2072640 (-)	1386	WP_168227661.1	radical SAM protein	-
FOB43_RS09885 (FOB43_09885)	-	2072743..2072919 (-)	177	WP_157760154.1	hypothetical protein	-
FOB43_RS09890 (FOB43_09890)	-	2073435..2074685 (+)	1251	WP_168227662.1	HlyD family efflux transporter periplasmic adaptor subunit	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 47790.78 Da
• Isoelectric Point: 5.6281

>NTDB_id=435795 FOB43_RS09875 WP_168227660.1 2069890..2071203(+) (pilR) [Chromobacterium violaceum strain FDAARGOS_635]
MTKTLRVLIVDDEPDIRELLELTLLKMGLAPVCAGSVAEARSALDAGGFDLALTDMRLPDGEGLEVVNHIGESGLDVPIA
VITAYGSADNAVRAMKAGAFDYLQKPVSLAQLRSLVKTALKVETPVRAAVQQRLLGESPAIQEVLRLTDKLSRSQAAVYI
GGESGTGKEQAARLIHELGPRADKPFVAVNCGAIPESLMESEFFGCRKGAFTGADADRDGFFQQAQGGTLFLDEVAELPL
AMQVKLLRAIQEKTVRKLGASQEEAVDARIICATHRDLAVRVESGQFRQDLYYRLNVLQLRMPPLRELRDDIPLFAERLL
QRFGGASAPQLSADARRALQDYAYPGNFRELENILERAVALAAGPALSREDLQLTPCAEHAPEPGSGEPLQDYLDRVERE
AIVKALEGTRYNRTQAAKKLGVTFRSLRYRMERLGVK

Nucleotide

• Length: 1314 bp

>NTDB_id=435795 FOB43_RS09875 WP_168227660.1 2069890..2071203(+) (pilR) [Chromobacterium violaceum strain FDAARGOS_635]
ATGACTAAGACACTGCGCGTATTGATCGTCGACGACGAACCGGACATCCGCGAACTGCTGGAACTGACCTTGCTGAAAAT
GGGCCTCGCCCCGGTATGCGCCGGCAGCGTGGCCGAGGCGCGTTCCGCGCTGGACGCGGGCGGGTTCGACCTGGCGCTGA
CCGATATGCGGCTGCCTGACGGCGAGGGCTTGGAGGTGGTCAACCACATCGGCGAGTCCGGGCTGGATGTGCCCATCGCC
GTGATCACCGCCTACGGCAGCGCCGACAACGCGGTGCGGGCGATGAAGGCCGGCGCTTTCGACTACTTGCAGAAGCCGGT
CAGCCTGGCCCAGCTGCGCAGCCTGGTGAAGACGGCGCTGAAGGTGGAAACGCCGGTCCGCGCCGCCGTCCAGCAGCGGC
TGCTGGGCGAGTCGCCGGCGATACAGGAAGTGCTGCGGCTGACGGACAAGCTGTCGCGCAGCCAGGCCGCGGTGTACATC
GGCGGGGAGTCCGGCACCGGCAAGGAACAGGCGGCGCGGCTGATCCACGAACTGGGTCCGCGCGCCGACAAGCCCTTCGT
CGCCGTCAACTGCGGCGCGATCCCGGAAAGCCTGATGGAGAGCGAGTTCTTCGGCTGCCGCAAGGGCGCGTTCACCGGAG
CGGACGCCGACCGCGACGGCTTCTTCCAGCAGGCGCAGGGCGGCACCTTGTTCCTGGACGAAGTGGCCGAGCTGCCGCTG
GCGATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAGACCGTGCGCAAGCTGGGCGCCAGCCAGGAAGAGGCGGTCGA
TGCCCGCATCATCTGCGCCACCCACCGCGATCTGGCCGTGCGGGTGGAGTCCGGGCAGTTCCGCCAGGACCTGTACTACC
GCCTCAACGTGCTGCAGCTGAGAATGCCGCCGCTGCGCGAGCTGCGCGACGACATTCCGTTGTTCGCAGAGCGGCTGCTG
CAGCGCTTCGGCGGCGCGTCCGCGCCGCAGTTGTCCGCCGACGCCCGCCGCGCGCTGCAGGACTACGCCTACCCCGGCAA
TTTCCGCGAGCTGGAGAACATCCTGGAGCGGGCGGTGGCGCTGGCCGCCGGGCCCGCGCTGTCGCGCGAAGACCTGCAGC
TGACGCCCTGCGCTGAGCACGCGCCGGAGCCCGGCAGCGGCGAGCCGCTGCAGGACTACCTGGACCGCGTCGAGCGCGAG
GCCATCGTCAAGGCGCTGGAGGGCACCCGCTACAACCGCACCCAGGCCGCTAAGAAACTGGGGGTCACCTTCCGCTCGCT
GCGTTACCGGATGGAGCGGCTGGGCGTGAAGTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-116)

• Sigma-54 interaction domain (Sigma54_activat) (134-300)

• Bacterial regulatory protein, Fis family (HTH_8) (394-433)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	59.091	100	0.595
pilR	Acinetobacter baumannii strain A118	44.978	100	0.471
luxO	Vibrio cholerae strain A1552	39.713	95.652	0.38