Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   HCU65_RS15980 Genome accession   NZ_CP050705
Coordinates   3211348..3213642 (-) Length   764 a.a.
NCBI ID   WP_219946563.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain PENSV20     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3206348..3218642
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HCU65_RS15940 (HCU65_15980) - 3206819..3207250 (+) 432 WP_003327161.1 Na(+)/H(+) antiporter subunit B -
  HCU65_RS15945 (HCU65_15985) - 3207250..3207591 (+) 342 WP_003327160.1 Na(+)/H(+) antiporter subunit C -
  HCU65_RS15950 (HCU65_15990) - 3207584..3209065 (+) 1482 WP_106033960.1 Na+/H+ antiporter subunit D -
  HCU65_RS15955 (HCU65_15995) - 3209071..3209547 (+) 477 WP_003327158.1 Na+/H+ antiporter subunit E -
  HCU65_RS15960 (HCU65_16000) - 3209547..3209831 (+) 285 WP_003327157.1 Na(+)/H(+) antiporter subunit F1 -
  HCU65_RS15965 (HCU65_16005) mnhG 3209815..3210189 (+) 375 WP_106033959.1 monovalent cation/H(+) antiporter subunit G -
  HCU65_RS15970 (HCU65_16010) - 3210228..3210608 (-) 381 WP_219946562.1 hotdog fold thioesterase -
  HCU65_RS15975 (HCU65_16015) comA 3210626..3211267 (-) 642 WP_003327154.1 response regulator transcription factor Regulator
  HCU65_RS15980 (HCU65_16020) comP 3211348..3213642 (-) 2295 WP_219946563.1 histidine kinase Regulator
  HCU65_RS15985 (HCU65_16025) comX 3213653..3213817 (-) 165 WP_106045488.1 competence pheromone ComX -
  HCU65_RS15990 (HCU65_16030) - 3213830..3214690 (-) 861 WP_219947832.1 polyprenyl synthetase family protein -
  HCU65_RS15995 (HCU65_16035) degQ 3214874..3215017 (-) 144 WP_003327149.1 degradation enzyme regulation protein DegQ Regulator
  HCU65_RS16000 (HCU65_16040) - 3215477..3215836 (+) 360 WP_106033956.1 hypothetical protein -
  HCU65_RS16005 (HCU65_16045) - 3215855..3217087 (-) 1233 WP_003327147.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 764 a.a.        Molecular weight: 88368.66 Da        Isoelectric Point: 8.0294

>NTDB_id=434147 HCU65_RS15980 WP_219946563.1 3211348..3213642(-) (comP) [Bacillus atrophaeus strain PENSV20]
MKAWHNKISILLILISLVYVGYLTYISSNKLLVGTTLEKNKANEAVITNIEEFSIAYDSGVQKGDVIKSINNHKLTSSFD
VQKNDLSHVSSLIVERDGKEIKINFDLMSGSNFSTLLIPLIFYIVCLFCCFFILKINESKKLLSALILIIFLLSASLAYV
SAGGSAKGDLLSRCIMVFTLTTVLLNYLLFLYQYFKELGTTLFNKKVFILYFISIFNVAFELLRKNLFFKDYVPKLNLLT
FFILFIIVVVYFGIVLYKNKDTEQAHILKALTIINIISFSPFLCLYLIPYVFLNVQYVSSFVTASFMLLIPFSLVYQFMT
NKIYNVDFILSRLKYYGFLALTPTIILLVTFELLRRPEEDHYIRLTVLIYIIMVAVFYYKEVLDFRFRLKRVSERFNYQD
SIYKFTQLIRDSSSVKQVFGELKTTILEVTVVSRAHIYEVTFDGNIKPYEEVNLHSYHDTYQKQFSKVISEIGKIVEFNN
GFVMKIGERGGKSFVILCLSKMNTPRLTLEEISWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTIE
EKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEDPCKNEVQDKLVQMNQQMSDVILMTRETCHELRPQLLYDLGLVK
ALSKLVAQQQESAPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAMKHSQASEVLIMLISFQNKIVLHYEDDGVGFDK
EKLNEQSMSMGLSGIKERVRALDGHLRIDTSVGNGLRADIEMEL

Nucleotide


Download         Length: 2295 bp        

>NTDB_id=434147 HCU65_RS15980 WP_219946563.1 3211348..3213642(-) (comP) [Bacillus atrophaeus strain PENSV20]
ATGAAGGCATGGCACAATAAAATTTCAATTTTATTGATTTTAATTAGTTTAGTCTATGTAGGTTATTTAACGTATATTAG
TTCAAATAAACTATTAGTTGGAACAACCCTTGAGAAAAACAAAGCAAATGAAGCAGTAATAACAAATATAGAGGAATTTT
CCATCGCTTATGATTCTGGAGTACAAAAAGGTGACGTTATAAAGAGTATAAATAATCATAAATTAACCAGTTCATTTGAT
GTTCAAAAGAATGACTTAAGTCACGTCAGTTCTTTGATTGTCGAGCGAGACGGGAAAGAAATAAAAATTAATTTTGATTT
AATGAGCGGTAGTAATTTTTCCACTCTGCTAATCCCATTAATTTTTTATATAGTTTGTCTATTTTGCTGTTTCTTTATAT
TAAAAATAAATGAATCAAAAAAGTTGCTATCTGCTTTAATTTTAATCATTTTTCTTTTGTCTGCTTCTCTGGCATATGTA
AGTGCAGGAGGATCTGCTAAGGGAGATTTGTTAAGCAGATGTATTATGGTATTTACGTTAACAACTGTACTGCTTAACTA
TCTACTCTTTCTGTATCAATATTTTAAAGAGCTAGGCACTACATTATTTAACAAGAAAGTTTTCATTTTATATTTTATTT
CTATATTTAATGTAGCATTTGAACTGTTGCGCAAGAATCTGTTTTTTAAGGATTATGTGCCTAAATTAAATCTACTTACT
TTCTTCATTTTATTTATAATAGTAGTTGTTTATTTTGGTATCGTTTTATACAAAAATAAGGATACTGAACAAGCGCATAT
TTTAAAGGCTCTTACAATAATTAATATCATTTCTTTTTCGCCATTTTTGTGTTTATATTTGATTCCTTATGTATTCTTAA
ATGTACAATATGTTTCTTCTTTTGTAACAGCTTCATTTATGCTGCTAATACCGTTTTCTTTGGTTTATCAATTTATGACA
AATAAAATTTATAATGTAGATTTTATTTTGAGTAGATTAAAATATTATGGTTTTTTAGCATTAACACCTACAATTATTTT
ACTTGTTACATTTGAGTTATTGAGAAGGCCAGAGGAAGACCATTATATTAGACTTACGGTTTTGATATATATTATTATGG
TGGCAGTTTTTTATTATAAGGAAGTACTTGATTTTAGATTTAGATTAAAGCGAGTTTCAGAAAGATTTAATTATCAAGAT
AGTATATATAAATTTACACAACTTATTAGAGACTCTTCTTCTGTAAAACAAGTATTTGGAGAACTGAAAACCACCATTCT
TGAGGTTACAGTTGTAAGCCGAGCCCATATATATGAAGTTACATTTGATGGGAATATAAAACCATACGAGGAAGTAAACT
TACATTCATATCATGATACCTATCAAAAACAATTTAGTAAAGTAATATCTGAAATTGGGAAAATCGTTGAATTTAATAAC
GGTTTTGTCATGAAGATAGGTGAGCGCGGGGGTAAATCATTTGTTATACTTTGCTTATCTAAAATGAATACTCCCCGTCT
CACGCTTGAAGAAATTTCTTGGCTTAAAACATTGGCTTTTTATACAAATGTCTCGATTGAAAACGTCATGAAAATTGAAG
AACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCAAACCCAGTCTGGCTCAAAAAACTGATGTACACTATCGAA
GAAAAACAACGATCCGACCTGGCACGTGACCTCCATGACTCCGTTCTTCAGGATTTGATCTCCTTAAAACGGCAATGCGA
GCTGTTTCTTGCTGATTTTAAGAAGGAAGATCCTTGTAAGAATGAGGTGCAGGACAAGCTGGTGCAAATGAATCAGCAGA
TGTCTGATGTGATTTTGATGACGAGGGAGACGTGCCATGAATTGCGGCCGCAGCTCTTGTATGATTTGGGATTGGTAAAG
GCGCTGTCAAAGCTTGTTGCGCAGCAGCAGGAAAGCGCGCCGTTTCATATTCGGCTGAATACGGGAAGGTTTACGGCATC
GCTCGATCTGGATTCTCAGCTGAATTTGTACCGGATTATTCAAGAGTTTTTATCAAATGCCATGAAGCATTCCCAAGCCA
GCGAGGTGCTGATTATGCTGATCAGTTTTCAAAATAAAATCGTTCTTCATTATGAGGATGACGGCGTTGGCTTTGATAAG
GAAAAATTGAATGAACAATCGATGAGTATGGGGCTTTCAGGCATTAAAGAGCGGGTTCGTGCGTTAGACGGGCATCTTCG
GATCGATACAAGCGTAGGAAATGGATTGCGAGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.016

100

0.567