Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   HCN55_RS17125 Genome accession   NZ_CP050532
Coordinates   3252862..3253761 (-) Length   299 a.a.
NCBI ID   WP_003243039.1    Uniprot ID   G9LQ79
Organism   Bacillus subtilis subsp. subtilis str. SMY     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3247862..3258761
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HCN55_RS17090 (HCN55_17100) mrpE 3248102..3248578 (+) 477 WP_003244015.1 Na+/H+ antiporter subunit E -
  HCN55_RS17095 (HCN55_17105) mrpF 3248578..3248862 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  HCN55_RS17100 (HCN55_17110) mnhG 3248846..3249220 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  HCN55_RS17105 (HCN55_17115) yuxO 3249259..3249639 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  HCN55_RS17110 (HCN55_17120) comA 3249658..3250302 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  HCN55_RS17115 (HCN55_17125) comP 3250383..3252692 (-) 2310 WP_003242894.1 two-component system sensor histidine kinase ComP Regulator
  HCN55_RS17120 (HCN55_17130) comX 3252707..3252874 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  HCN55_RS17125 (HCN55_17135) comQ 3252862..3253761 (-) 900 WP_003243039.1 ComX modifying isoprenyl transferase ComQ Regulator
  HCN55_RS17130 (HCN55_17140) degQ 3253946..3254086 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  HCN55_RS17135 (HCN55_17145) - 3254308..3254433 (+) 126 WP_003228793.1 hypothetical protein -
  HCN55_RS17140 (HCN55_17150) - 3254547..3254915 (+) 369 WP_003243784.1 hypothetical protein -
  HCN55_RS17145 (HCN55_17155) pdeH 3254891..3256120 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  HCN55_RS17150 (HCN55_17160) pncB 3256257..3257729 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  HCN55_RS17155 (HCN55_17165) pncA 3257745..3258296 (-) 552 WP_003243099.1 isochorismatase family cysteine hydrolase -

Sequence

Protein


Download         Length: 299 a.a.        Molecular weight: 34218.11 Da        Isoelectric Point: 4.8304

>NTDB_id=433769 HCN55_RS17125 WP_003243039.1 3252862..3253761(-) (comQ) [Bacillus subtilis subsp. subtilis str. SMY]
MKEIVEQNIFNEDLSQLLYSFIDSKETFSFAESTILHYVVFGGENLDVATRLGAGIEILILSSDIMDDLEDEDNHHALWM
KINRSESLNAALSLYTVGLTSIYSLNNNPLIFKYVLKYVNEAMQGQHDDITNKSKTEDESLEVIRLKCGSLIALANVAGV
LLATGEYNETVERYSYYKGIIAQISGDYYVLLSGNRSDIEKNKHTLIYLYLKRLFNDASEDLLYLISHKDLYYKSLLDKE
KFQEKLIKAGVTQYISVLLEIYKQKCISAIEQLNLDKEKKELIKECLLSYTKGDTRCKT

Nucleotide


Download         Length: 900 bp        

>NTDB_id=433769 HCN55_RS17125 WP_003243039.1 3252862..3253761(-) (comQ) [Bacillus subtilis subsp. subtilis str. SMY]
ATGAAGGAGATTGTGGAGCAAAACATATTTAACGAGGATTTGTCACAACTTCTTTACTCATTTATTGATTCTAAAGAAAC
ATTCTCCTTTGCTGAATCCACAATCTTACATTATGTTGTTTTTGGAGGGGAGAATTTAGATGTTGCAACAAGGCTTGGCG
CGGGAATAGAAATTCTTATTCTTTCATCAGATATTATGGATGATCTTGAAGATGAAGATAATCACCATGCATTATGGATG
AAAATTAATCGCTCGGAGTCGTTAAATGCAGCACTTTCCTTGTATACAGTAGGATTAACGAGTATTTATTCATTAAATAA
CAATCCTCTAATTTTTAAATATGTTTTAAAATACGTAAACGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CTAAAACAGAAGATGAAAGTTTAGAAGTAATTAGATTAAAATGTGGAAGTCTGATTGCACTAGCAAATGTAGCAGGTGTT
TTATTGGCTACAGGAGAATATAATGAAACAGTTGAAAGATATTCCTACTATAAAGGGATTATAGCTCAAATTTCTGGAGA
TTATTATGTTCTTTTATCCGGAAATCGCAGTGATATTGAAAAAAACAAACATACACTGATTTACTTATATCTTAAGCGCC
TTTTTAATGATGCTTCGGAAGATTTATTATACTTAATTTCACATAAAGACTTATATTATAAATCGTTACTTGATAAAGAG
AAATTCCAAGAAAAATTAATTAAAGCGGGAGTTACTCAATACATTTCGGTATTATTGGAAATATATAAACAGAAATGTAT
TTCTGCTATAGAACAATTAAATTTAGATAAAGAAAAAAAAGAGCTAATAAAGGAATGCTTATTAAGTTATACAAAGGGGG
ATACAAGATGCAAGACCTAA

Domains

Predicted by InterproScan.

Polyprenyl synthetase (polyprenyl_synt)

(44-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G9LQ79

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

100

100

1