Detailed information NTG0043107

Bioinformatically predicted

Overview

• Name: pilP
• Type: Machinery gene
• Locus tag: VEJY3_RS14245
• Genome accession: NC_016613
• Coordinates: 3146104..3146619 (-)
• Length: 171 a.a.
• NCBI ID: WP_014233149.1
• Uniprot ID: -
• Organism: Vibrio sp. EJY3
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3141104..3151619

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VEJY3_RS14230 (VEJY3_14040)	aroB	3142494..3143594 (-)	1101	WP_014233146.1	3-dehydroquinate synthase	-
VEJY3_RS14235 (VEJY3_14045)	aroK	3143626..3144144 (-)	519	WP_014233147.1	shikimate kinase AroK	-
VEJY3_RS14240 (VEJY3_14050)	pilQ	3144333..3146036 (-)	1704	WP_014233148.1	type IV pilus secretin PilQ	Machinery gene
VEJY3_RS14245 (VEJY3_14055)	pilP	3146104..3146619 (-)	516	WP_014233149.1	pilus assembly protein PilP	Machinery gene
VEJY3_RS14250 (VEJY3_14060)	pilO	3146609..3147202 (-)	594	WP_014233150.1	type 4a pilus biogenesis protein PilO	Machinery gene
VEJY3_RS14255 (VEJY3_14065)	pilN	3147195..3147770 (-)	576	WP_014233151.1	PilN domain-containing protein	Machinery gene
VEJY3_RS14260 (VEJY3_14070)	pilM	3147754..3148770 (-)	1017	WP_014233152.1	type IV pilus assembly protein PilM	Machinery gene
VEJY3_RS14265 (VEJY3_14075)	-	3148914..3151481 (+)	2568	WP_014233153.1	penicillin-binding protein 1A	-

Sequence

Protein

• Length: 171 a.a.
• Molecular weight: 18917.06 Da
• Isoelectric Point: 10.3600

>NTDB_id=43107 VEJY3_RS14245 WP_014233149.1 3146104..3146619(-) (pilP) [Vibrio sp. EJY3]
MKNKSLLMVLIGALLVGCQANDESLTDFIRDVENQARRDVEKLKPSDQYVAVAYAPQTMRAPFELPREATIATQPIARKD
CWQPPSRTRTGKLEKVPLSQLRLKGVMGIGSTVSGLVQAPNGTVYKVAPGQYLGRNNGKVTKITHSYLLIDETLPDGLGC
WQKRKVKLALR

Nucleotide

• Length: 516 bp

>NTDB_id=43107 VEJY3_RS14245 WP_014233149.1 3146104..3146619(-) (pilP) [Vibrio sp. EJY3]
ATGAAAAATAAATCTTTGCTGATGGTTCTGATAGGGGCGTTGCTGGTGGGGTGTCAGGCAAATGATGAGTCGTTAACGGA
CTTTATTCGTGACGTTGAAAATCAGGCGAGGCGGGATGTTGAGAAGCTCAAACCATCGGACCAATATGTCGCGGTTGCCT
ACGCGCCGCAAACAATGAGAGCGCCTTTTGAATTACCCCGAGAGGCGACGATTGCGACTCAACCTATTGCGAGAAAAGAC
TGCTGGCAGCCGCCATCCAGAACTCGTACTGGCAAGTTAGAAAAAGTTCCGTTAAGTCAGCTAAGGCTGAAAGGCGTTAT
GGGGATAGGTAGCACAGTCTCCGGGCTTGTGCAGGCTCCGAATGGAACGGTTTACAAAGTCGCCCCCGGTCAGTATCTCG
GACGTAATAACGGTAAGGTCACCAAAATTACCCATTCTTACTTACTGATCGACGAAACGCTGCCTGATGGTTTGGGTTGC
TGGCAGAAACGCAAAGTAAAGCTGGCTTTGAGATAG

Domains

Predicted by InterproScan.

• Pilus assembly protein, PilP (PilP) (25-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilP	Vibrio campbellii strain DS40M4	80.702	100	0.807
pilP	Vibrio cholerae strain A1552	55.233	100	0.556