Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   HB753_RS06880 Genome accession   NZ_CP050270
Coordinates   1402483..1403523 (-) Length   346 a.a.
NCBI ID   WP_019804680.1    Uniprot ID   -
Organism   Streptococcus mutans strain S4     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1397483..1408523
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HB753_RS06860 (HB753_06860) - 1398916..1399452 (-) 537 WP_002262043.1 VanZ family protein -
  HB753_RS06865 (HB753_06865) rlmN 1399452..1400537 (-) 1086 WP_002264424.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  HB753_RS06870 (HB753_06870) - 1400534..1401082 (-) 549 WP_002266328.1 YutD family protein -
  HB753_RS06875 (HB753_06875) - 1401079..1402410 (-) 1332 WP_019804681.1 bifunctional metallophosphatase/5'-nucleotidase -
  HB753_RS06880 (HB753_06880) sepM 1402483..1403523 (-) 1041 WP_019804680.1 S16 family serine protease SepM Regulator
  HB753_RS06885 (HB753_06885) coaD 1403501..1404001 (-) 501 WP_002264419.1 pantetheine-phosphate adenylyltransferase -
  HB753_RS06890 (HB753_06890) rsmD 1403991..1404530 (-) 540 WP_002262037.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  HB753_RS06895 (HB753_06895) - 1405113..1406888 (-) 1776 WP_019804678.1 oleate hydratase -
  HB753_RS06900 (HB753_06900) - 1407009..1407575 (-) 567 WP_002268842.1 TetR/AcrR family transcriptional regulator -
  HB753_RS06905 (HB753_06905) - 1407770..1408015 (-) 246 WP_002268902.1 hypothetical protein -
  HB753_RS06910 (HB753_06910) - 1408056..1408259 (-) 204 WP_002263011.1 hypothetical protein -

Sequence

Protein


Download         Length: 346 a.a.        Molecular weight: 37981.00 Da        Isoelectric Point: 10.1655

>NTDB_id=431063 HB753_RS06880 WP_019804680.1 1402483..1403523(-) (sepM) [Streptococcus mutans strain S4]
MKTNKKFKWWLISGISLILLLMVFFFPLPYYLEMPGGAYDIRSVVTVNHKEDKEKGSYNFVAVSLSKATPIQVLYAWLTP
FTEITSAKETTGGVSDADYMRINQFYMETSQNGAIYKALSLAHKKASFNYMGVYVLQVSKNSTFKGVLNIADTVTGVNDK
TFHSSKELIKYVSGLKLGSKVSVQYTSENKKKTAKGKVIKLSNGKNGIGIGLVDHTKVTSDDKIEFSTNGIGGPSAGLMF
TLDIYDQLVKEDLRKGRIIAGTGTIGEDGSVGDIGGADMKVAAADRINADIFFVPNNLVSKAILKKNPKALTNYQEAKQA
AKKLGTKMKIVPVKNVQEAIDYLRKH

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=431063 HB753_RS06880 WP_019804680.1 1402483..1403523(-) (sepM) [Streptococcus mutans strain S4]
GTGAAAACAAACAAAAAATTTAAATGGTGGCTAATCAGCGGTATCAGTCTTATTTTGCTTTTAATGGTATTCTTTTTTCC
TCTTCCTTACTATTTAGAAATGCCCGGCGGAGCCTATGATATTCGTTCTGTTGTGACGGTTAATCATAAAGAAGATAAAG
AGAAAGGATCTTATAATTTTGTAGCTGTCTCTCTTAGTAAGGCAACCCCCATACAAGTCCTCTATGCTTGGTTGACCCCT
TTTACAGAAATTACCAGTGCCAAGGAAACAACTGGTGGTGTTAGTGATGCGGATTATATGAGGATTAATCAGTTTTATAT
GGAAACCTCACAAAATGGAGCTATCTATAAAGCTCTTTCTTTAGCACATAAAAAGGCAAGCTTTAATTATATGGGTGTTT
ATGTTTTGCAGGTTAGTAAGAATTCAACATTCAAGGGTGTTTTAAATATTGCTGATACTGTAACAGGCGTTAATGACAAG
ACCTTTCATAGTTCAAAAGAATTGATTAAATATGTGTCTGGACTGAAATTAGGCAGCAAGGTCAGTGTTCAATATACTTC
TGAAAATAAGAAGAAAACAGCCAAGGGCAAAGTTATTAAATTGTCAAATGGCAAAAATGGTATTGGCATTGGCCTGGTTG
ATCATACCAAGGTCACTTCTGATGATAAAATCGAATTTAGCACAAATGGTATTGGAGGGCCAAGTGCCGGTCTCATGTTT
ACCCTTGATATTTACGATCAACTAGTGAAAGAGGACTTACGTAAGGGTCGTATTATTGCAGGTACTGGTACTATTGGAGA
AGACGGGTCTGTTGGGGATATTGGCGGTGCTGATATGAAAGTGGCAGCAGCAGATAGGATTAATGCAGATATCTTTTTTG
TTCCCAATAATCTTGTAAGTAAGGCAATTTTGAAAAAAAATCCCAAAGCTCTCACTAATTATCAAGAAGCTAAGCAGGCT
GCAAAAAAATTAGGCACTAAGATGAAGATTGTCCCTGTTAAAAATGTGCAGGAGGCTATTGATTACCTAAGAAAACACTA
A

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(131-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

99.133

100

0.991