Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   HB753_RS02200 Genome accession   NZ_CP050270
Coordinates   412173..413174 (+) Length   333 a.a.
NCBI ID   WP_002264971.1    Uniprot ID   -
Organism   Streptococcus mutans strain S4     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 407173..418174
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HB753_RS02175 (HB753_02175) - 407179..407697 (+) 519 WP_002262792.1 hypothetical protein -
  HB753_RS02180 (HB753_02180) celB 407713..409071 (+) 1359 WP_002271288.1 PTS cellobiose transporter subunit IIC -
  HB753_RS02185 (HB753_02185) - 409337..410107 (+) 771 WP_002268260.1 carbonic anhydrase -
  HB753_RS02190 (HB753_02190) - 410234..410815 (+) 582 WP_002271286.1 CDP-archaeol synthase -
  HB753_RS02195 (HB753_02195) - 410931..412010 (-) 1080 WP_002268574.1 M24 family metallopeptidase -
  HB753_RS02200 (HB753_02200) ccpA 412173..413174 (+) 1002 WP_002264971.1 catabolite control protein A Regulator
  HB753_RS02205 (HB753_02205) - 413322..414782 (+) 1461 WP_019804858.1 alpha-amylase -
  HB753_RS02210 (HB753_02210) - 414892..415890 (+) 999 WP_002268262.1 glycosyltransferase -
  HB753_RS02215 (HB753_02215) - 415892..417226 (+) 1335 WP_002264974.1 glycosyltransferase family 4 protein -
  HB753_RS02220 (HB753_02220) - 417305..417496 (+) 192 WP_002266172.1 hypothetical protein -
  HB753_RS02225 (HB753_02225) - 417490..418130 (+) 641 Protein_423 AAA family ATPase -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36647.91 Da        Isoelectric Point: 6.8583

>NTDB_id=431040 HB753_RS02200 WP_002264971.1 412173..413174(+) (ccpA) [Streptococcus mutans strain S4]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIATMYKYNIVLASSDEDDDKEVNVINTLFAKQVDGIIFMGHHLTEKIRAEFSRARTPVVLSGTVDLEHQLPS
VNIDHSKAAQDAVALLAKHHDKIAFVSGPFIDDINGKVRLAGYKEGLKKKGLPFKEGLVFEAQYKYQEGYQLAQRVINSG
ATAAYVAEDELAAGLLNGLFAAGKKVPEDFEIITSNDSTIALYTRPNMTSISQPIYDLGAVAMRMLTKIMNKEELEEKEI
VLNHGIRERGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=431040 HB753_RS02200 WP_002264971.1 412173..413174(+) (ccpA) [Streptococcus mutans strain S4]
ATGAACACAGATGACACAATCACTATTTATGATGTTGCCCGTGAAGCGGGAGTGTCCATGGCAACTGTCAGCCGTGTTGT
GAATGGAAATAAAAATGTCAAAGAGAATACCCGCAAAAAAGTCCTAGAAGTCATTGACCGTCTTGATTATCGGCCAAATG
CTGTGGCGCGTGGTTTGGCAAGTAAGAAAACGACTACGGTAGGTGTGGTTATCCCTAATATTGCTAATGCTTATTTTTCT
ATTTTAGCTAAGGGAATTGATGACATTGCAACCATGTATAAATATAATATTGTACTGGCTTCAAGTGATGAAGATGACGA
TAAGGAAGTCAATGTTATCAATACTTTATTTGCTAAACAGGTTGATGGTATTATTTTTATGGGACATCATTTAACTGAAA
AAATTCGCGCTGAATTTTCACGAGCACGGACACCGGTTGTTTTATCAGGTACTGTAGATCTGGAGCATCAACTCCCCAGT
GTTAATATTGATCATAGTAAGGCAGCACAAGATGCCGTAGCTTTATTGGCCAAACATCATGATAAGATTGCTTTTGTATC
GGGTCCCTTTATTGATGATATAAATGGCAAGGTACGTCTGGCTGGTTATAAAGAAGGCCTGAAAAAGAAAGGATTGCCTT
TCAAAGAAGGACTTGTTTTTGAAGCTCAATATAAGTATCAAGAAGGATATCAGTTAGCGCAGCGTGTCATTAATTCAGGC
GCAACAGCTGCTTATGTTGCTGAGGATGAGTTGGCTGCTGGGCTGTTAAATGGTTTGTTTGCTGCTGGTAAGAAAGTCCC
AGAAGACTTTGAAATTATCACGAGTAATGACTCTACTATTGCGCTTTATACTCGTCCTAATATGACATCTATCAGTCAGC
CGATTTATGATTTAGGAGCAGTTGCTATGCGCATGTTAACAAAGATTATGAACAAGGAAGAATTGGAAGAAAAAGAAATT
GTTCTTAATCATGGTATCAGAGAAAGAGGAACAACTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781

  ccpA Streptococcus pneumoniae D39

75.676

100

0.757

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.399

0.553