Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   HBA50_RS08400 Genome accession   NZ_CP050133
Coordinates   1693552..1694283 (-) Length   243 a.a.
NCBI ID   WP_005591084.1    Uniprot ID   A0AAV3EDI1
Organism   Streptococcus cristatus ATCC 51100     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1688552..1699283
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HBA50_RS08385 (HBA50_08385) trmB 1691029..1691667 (-) 639 WP_045498545.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  HBA50_RS08390 (HBA50_08390) ccrZ 1691664..1692458 (-) 795 WP_005591081.1 cell cycle regulator CcrZ -
  HBA50_RS08395 (HBA50_08395) - 1692509..1693555 (-) 1047 WP_045498541.1 ABC transporter permease -
  HBA50_RS08400 (HBA50_08400) pptA 1693552..1694283 (-) 732 WP_005591084.1 ABC transporter ATP-binding protein Regulator
  HBA50_RS08405 (HBA50_08405) - 1694351..1694761 (+) 411 WP_005591086.1 HIT family protein -
  HBA50_RS08410 (HBA50_08410) - 1694771..1695046 (+) 276 WP_005591088.1 hypothetical protein -
  HBA50_RS08415 (HBA50_08415) comB 1695147..1696502 (-) 1356 WP_045498538.1 bacteriocin secretion accessory protein Regulator
  HBA50_RS08420 (HBA50_08420) comA 1696517..1698670 (-) 2154 WP_045498536.1 peptide cleavage/export ABC transporter ComA Regulator
  HBA50_RS08425 (HBA50_08425) - 1699022..1699246 (-) 225 WP_235285264.1 hypothetical protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27081.58 Da        Isoelectric Point: 4.7393

>NTDB_id=430234 HBA50_RS08400 WP_005591084.1 1693552..1694283(-) (pptA) [Streptococcus cristatus ATCC 51100]
MLEIKELTGGYVNIPVLKDVSFEVGDGQLVGLIGLNGAGKSTTINEIIGLLTPYKGEIRIDGLQLGKNPSAYRKKIGFIP
ETPSLYEELTLREHIETVAMAYDIEQEVAFERVERLLTIFRLKDKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIQLLDEEKKKGKSILMSTHVLDSAEKMCDSFVILHKGQVRAKGNLAELRGEFQMPDASLNDIYLALTEE
AAL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=430234 HBA50_RS08400 WP_005591084.1 1693552..1694283(-) (pptA) [Streptococcus cristatus ATCC 51100]
ATGTTAGAAATCAAAGAGCTTACGGGCGGCTATGTAAATATCCCGGTTTTAAAGGATGTCAGCTTTGAAGTGGGCGATGG
TCAGCTGGTCGGTTTAATTGGTCTCAATGGTGCTGGTAAATCCACTACCATCAATGAAATTATCGGTTTATTGACACCTT
ACAAGGGAGAAATTCGGATTGATGGTTTGCAGCTGGGAAAAAATCCTAGCGCTTACCGTAAGAAGATTGGCTTTATCCCA
GAGACACCGAGCCTTTATGAGGAGTTGACCCTGCGTGAGCATATTGAAACGGTTGCCATGGCTTACGATATTGAGCAGGA
AGTCGCTTTTGAGCGCGTGGAGCGCCTCTTAACTATCTTCCGACTCAAGGATAAGTTGGACTGGTTTCCAGTGCATTTCT
CTAAGGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTCGTGGTAGATCCTAGTCTTTTTATCGTGGATGAGCCTTTT
CTGGGGCTGGATCCGGTAGCTATTGCAGACCTTATCCAGCTCTTGGATGAGGAAAAGAAAAAAGGTAAGTCCATCCTCAT
GAGTACCCATGTTTTGGACTCAGCTGAGAAGATGTGTGATAGCTTTGTGATTTTGCATAAAGGGCAGGTGCGCGCCAAAG
GCAATCTAGCTGAGTTGCGAGGAGAATTTCAGATGCCGGACGCTAGTCTCAATGACATCTATCTGGCCTTGACGGAAGAG
GCTGCGCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

98.354

0.716
  pptA Streptococcus thermophilus LMD-9

71.967

98.354

0.708