Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   BDGL_002267 Genome accession   NC_016603
Coordinates   2460255..2460638 (-) Length   127 a.a.
NCBI ID   YP_004996535.1    Uniprot ID   F0KN68
Organism   Acinetobacter pittii PHEA-2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2455255..2465638
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BDGL_002264 pilJ 2457152..2459230 (-) 2079 YP_004996532.1 methyl-accepting chemotaxis protein -
  BDGL_002265 pilI 2459273..2459809 (-) 537 YP_004996533.1 twitching motility protein -
  BDGL_002266 pilH 2459870..2460232 (-) 363 YP_004996534.1 twitching motility protein -
  BDGL_002267 pilG 2460255..2460638 (-) 384 YP_004996535.1 twitching motility protein Regulator
  BDGL_002268 - 2460962..2461561 (+) 600 YP_004996536.1 hypothetical protein -
  BDGL_002269 nolF 2461630..2462739 (+) 1110 YP_004996537.1 HlyD family secretion protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=42972 BDGL_002267 YP_004996535.1 2460255..2460638(-) (pilG) [Acinetobacter pittii PHEA-2]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=42972 BDGL_002267 YP_004996535.1 2460255..2460638(-) (pilG) [Acinetobacter pittii PHEA-2]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACCTTATT
ACAGCGCGAAGGCTGTGAAGTCATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F0KN68

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment