Detailed information NTG0042970

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: BDGL_002047
• Genome accession: NC_016603
• Coordinates: 2205490..2207922 (-)
• Length: 810 a.a.
• NCBI ID: YP_004996315.1
• Uniprot ID: F0KL75
• Organism: Acinetobacter pittii PHEA-2
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	2200834..2208693	2205490..2207922	within	0

Gene organization within MGE regions

Location: 2200834..2208693

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BDGL_002041	purM	2200834..2201112 (+)	279	YP_004996309.1	phosphoribosylaminoimidazole synthetase	-
BDGL_002042	purM2	2201256..2201879 (+)	624	YP_004996310.1	phosphoribosylaminoimidazole synthetase	-
BDGL_002043	purN	2201876..2202505 (+)	630	YP_004996311.1	phosphoribosylglycinamide formyltransferase 1	-
BDGL_002044	-	2202584..2203384 (-)	801	YP_004996312.1	putative hydrolase	-
BDGL_002045	nhaA	2203404..2204420 (-)	1017	YP_004996313.1	putative protease	-
BDGL_002046	htrB	2204554..2205537 (+)	984	YP_004996314.1	putative lipid A biosynthesis lauroyl acyltransferase	-
BDGL_002047	comA/comEC	2205490..2207922 (-)	2433	YP_004996315.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
BDGL_002048	lolD	2208007..2208693 (-)	687	YP_004996316.1	transport protein of outer membrane lipoproteins (ABC superfamily, ATP-bind)	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 92680.13 Da
• Isoelectric Point: 8.9148

>NTDB_id=42970 BDGL_002047 YP_004996315.1 2205490..2207922(-) (comA/comEC) [Acinetobacter pittii PHEA-2]
MLKLILMGWIGGIAFMGIDIPLIMQYGWLGKVLLVIGFIFYIFKRNIFLNRPILKTIYCLVCAISPFTIGHQYAQHALNQ
RLELRQMQPISLDIVVYVDRISEEKEDKTQQPVQVLGQSLHPVNWLLYLKNQKVISAVDEPKLQLGHYYRISGKTKPAHS
YAVAGVFDQEQWFIQRNIMSGFSVQHIEALSSDEIYQLGYQHHLKEQQKFFNRQKLNIEKLRLTFRLMLKQSPLQNKGLL
LALLTGDESLLNDEIKNQFKELGISHLLAISGPHVLIFAIMLSWVLHQLIRRYYPQLYLHQPKQIWTMIPLCFGVLIYTA
FVGFEIPALRTLLSVFLFAFLVLIKVAVKPFSLLVYSASLLLLFDPFSVLSAGFWLSYGSCFILLRIYQTIEQAPNVVST
SLLSRIILFSKILIESQGKIFIALCPLMLIFFQQISWVAPFTNIIAVPLLGGVIVPLNIFAACVWLIFKSFGNLLFQIND
VLISIVLSCFNLLEKLSLPLQGFSLTPLDLVCLSFVIIILFLPRGVLPKSWGLICCLPLIIPDKSSQQIQLNIIDVGQGQ
SIFLQHPQQTWLIDTGGSYDEKAFSIGQNVVIPYLRQKGIKQLDHVVLSHLDQDHSGAFPSIAQTFSIKQVISNELWKDQ
ITEPFTYCHQGQKWQYPQLDIEILWPKEKDLNLFSSNQNQYSCVIYIHLKQINGYQNYLIMGDAGLEAEYQLMKEYPDLK
VDVLVLGHHGSKHSSAYDFLATLNPKLVVASAGFNNRYGHPSKEVLARVQALNIPFKSTVEQGTLSFVSRNQEMVLYTRR
FERTWLHRNL

Nucleotide

• Length: 2433 bp

>NTDB_id=42970 BDGL_002047 YP_004996315.1 2205490..2207922(-) (comA/comEC) [Acinetobacter pittii PHEA-2]
ATGTTAAAACTTATATTAATGGGGTGGATTGGGGGTATTGCATTTATGGGGATAGATATCCCTTTAATAATGCAATATGG
GTGGTTAGGTAAAGTCTTGCTTGTTATCGGCTTTATTTTTTATATTTTTAAGAGAAATATTTTCTTAAATCGCCCCATAT
TAAAAACCATTTACTGTCTAGTCTGTGCTATTAGTCCCTTTACTATAGGACATCAATATGCTCAGCATGCCTTAAATCAA
AGATTAGAACTGCGACAAATGCAGCCTATATCTTTAGATATTGTTGTGTATGTCGACCGTATAAGTGAAGAAAAAGAAGA
TAAGACACAACAACCCGTTCAGGTACTAGGACAGTCCTTACACCCCGTTAATTGGCTATTATATTTAAAAAATCAAAAAG
TAATCTCAGCCGTAGATGAGCCAAAATTACAATTAGGTCATTATTATCGAATTTCTGGCAAAACCAAACCTGCTCATAGT
TACGCAGTGGCTGGTGTTTTTGACCAAGAACAATGGTTCATTCAACGAAATATAATGTCTGGTTTTAGTGTTCAGCATAT
TGAGGCTTTAAGCTCTGATGAAATTTATCAGTTGGGTTATCAACATCATTTAAAAGAGCAACAAAAATTCTTTAACAGAC
AAAAATTAAATATAGAAAAATTACGTCTAACATTTAGATTAATGTTAAAACAATCTCCTTTGCAAAATAAAGGTCTGTTA
TTAGCTTTGTTAACAGGGGATGAAAGTCTCTTAAATGATGAGATTAAAAATCAATTTAAGGAATTAGGAATCTCTCATCT
GTTAGCCATTTCAGGGCCTCATGTACTCATTTTTGCTATCATGTTGTCTTGGGTATTACATCAATTAATAAGACGTTATT
ATCCGCAGCTTTATTTGCATCAACCTAAACAAATTTGGACCATGATTCCATTATGTTTCGGTGTTTTAATTTATACGGCA
TTTGTTGGTTTTGAAATTCCCGCCTTAAGAACTTTACTCTCAGTATTTTTATTTGCTTTTTTGGTATTGATTAAAGTGGC
TGTTAAACCATTTTCACTCTTGGTTTATAGTGCAAGTCTACTTTTACTTTTCGATCCCTTCAGTGTTTTATCCGCAGGTT
TTTGGCTATCTTATGGTTCTTGCTTTATTTTATTACGGATTTATCAAACTATAGAGCAGGCTCCAAATGTTGTTTCAACT
AGTCTGTTATCTAGAATCATTCTTTTCAGTAAAATTTTAATTGAATCTCAAGGCAAAATATTTATTGCCTTGTGTCCCTT
AATGCTGATTTTCTTTCAACAGATTTCATGGGTTGCTCCTTTTACAAATATTATTGCAGTTCCTTTACTCGGAGGAGTGA
TTGTTCCTTTAAATATTTTTGCAGCTTGTGTATGGCTTATTTTTAAATCATTCGGAAATTTACTTTTTCAAATTAATGAC
GTCCTGATTAGTATAGTACTGTCATGTTTTAATCTTTTAGAAAAGTTATCTCTACCATTACAAGGTTTTAGCCTCACACC
ACTTGATTTAGTGTGCCTTAGCTTCGTTATTATTATCTTATTTTTACCGCGTGGGGTTTTACCCAAATCTTGGGGGCTAA
TATGCTGTTTACCCTTGATCATTCCAGATAAGTCGTCCCAGCAAATTCAATTAAATATTATAGATGTAGGACAGGGGCAA
TCTATATTCTTACAGCACCCGCAGCAGACATGGTTAATTGATACGGGTGGTTCTTATGATGAGAAAGCTTTTAGTATTGG
TCAAAATGTGGTGATTCCATATTTACGCCAAAAGGGAATTAAACAACTGGATCACGTCGTACTATCTCATCTCGATCAAG
ATCATAGCGGAGCATTTCCTTCTATTGCTCAGACTTTTTCTATTAAACAAGTCATATCAAATGAATTATGGAAAGACCAA
ATTACAGAACCATTTACTTATTGTCATCAAGGGCAAAAATGGCAATATCCACAATTAGATATTGAAATTCTTTGGCCTAA
AGAAAAAGATTTAAACTTATTTTCTTCAAATCAAAATCAATATTCTTGTGTGATTTATATTCATTTAAAACAGATAAATG
GCTATCAAAATTATTTAATCATGGGTGATGCAGGGTTGGAAGCAGAATATCAACTCATGAAAGAATATCCTGATTTAAAG
GTGGATGTCTTGGTATTAGGTCATCATGGAAGTAAACATAGTTCAGCTTACGACTTCTTAGCGACGTTAAACCCCAAGCT
TGTTGTTGCTTCTGCTGGCTTTAATAATCGTTATGGTCATCCAAGCAAAGAGGTTTTAGCGAGAGTACAAGCACTTAATA
TTCCATTTAAAAGCACAGTTGAGCAAGGAACATTAAGCTTTGTATCTCGCAATCAAGAGATGGTTTTATACACTCGACGT
TTCGAGCGTACTTGGCTTCACCGGAATTTGTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (555-639)

• Competence protein (Competence) (243-522)

3D structure

• AlphaFold DB: F0KL75

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	69.468	99.877	0.694
comA/comEC	Acinetobacter baumannii strain A118	68.85	99.877	0.688
comA/comEC	Acinetobacter baylyi ADP1	48.585	100	0.488