Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   BDGL_000433 Genome accession   NC_016603
Coordinates   473681..474388 (-) Length   235 a.a.
NCBI ID   YP_004994701.1    Uniprot ID   F0KI81
Organism   Acinetobacter pittii PHEA-2     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 468681..479388
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BDGL_000429 purA 469763..471082 (+) 1320 YP_004994697.1 adenylosuccinate synthase -
  BDGL_000430 - 471205..471522 (+) 318 YP_004994698.1 hypothetical protein -
  BDGL_000431 oma1 471638..472417 (+) 780 YP_004994699.1 putative metalloprotease -
  BDGL_000432 tas 472472..473521 (-) 1050 YP_004994700.1 putative oxidoreductase, aldo/keto reductase family -
  BDGL_000433 crp 473681..474388 (-) 708 YP_004994701.1 cAMP-regulatory protein Regulator
  BDGL_000434 - 474629..474748 (+) 120 YP_004994702.1 hypothetical protein -
  BDGL_000435 - 474827..475249 (+) 423 YP_004994703.1 hypothetical protein -
  BDGL_000436 phnO 475345..475770 (+) 426 YP_004994704.1 aminoalkylphosphonic acid N-acetyltransferase -
  BDGL_000437 yebA 475767..476576 (-) 810 YP_004994705.1 peptidase M23B -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26526.09 Da        Isoelectric Point: 4.6573

>NTDB_id=42963 BDGL_000433 YP_004994701.1 473681..474388(-) (crp) [Acinetobacter pittii PHEA-2]
MTSNFSQLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEPNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKMTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFDASLEENTVSDDDYDDEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=42963 BDGL_000433 YP_004994701.1 473681..474388(-) (crp) [Acinetobacter pittii PHEA-2]
ATGACTTCAAATTTTTCACAACTCAGCACAGATGCTTTATCTCCGGGGCAACTACCTGAATCCGTTAAAGCATTGTTAAA
ACGTGCTCACATCAACAGATATCCAAAACGAACCACAATTGTTGATGCCGGAACAGAGTCAAAATCTTTATATTTAATTT
TAAAAGGCTCAGTTTCAATTATTTTGCGTGAAGATGACGAACGTGAAATTGTTGTTGCGTATTTAAATCCGGGCGATTTC
TTTGGGGAAATGGGGCTTTTCGAACCGAACCCTCAACGTACAGCCGAAGTTCGAACTCGTGATGTCTGTGAAATTGCAGA
GATCTCTTATGACAACTTCCACGAACTTAGCAAACAATACCCAGATTTAAGTTATGCTGTTTTTGCACAATTAGTTCGCC
GTCTAAAAAATACGACACGTAAAATGACAGATCTTGCGTTCATTGATGTGTCTGGTCGTATTGCACGTTGCTTAATCGAT
CTATCTTCTCAACCAGAAGCAATGATTTTGCCGAATGGTCGTCAAATTCGTATTACTCGTCAAGAAATTGGCCGTATTGT
GGGATGCTCACGTGAAATGGTTGGCCGTGTACTCAAAACCTTAGAAGATCAAGGTATGATCCAAACTGATGGTAAAGCCA
TTCTTATTTTTGATGCATCATTAGAAGAAAACACTGTTTCTGATGATGACTACGACGATGAAGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Crp-like helix-turn-helix domain (HTH_Crp_2)

(152-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F0KI81

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

97.447

100

0.974
  crp Vibrio cholerae strain A1552

47.087

87.66

0.413
  crp Haemophilus influenzae Rd KW20

48.718

82.979

0.404

Multiple sequence alignment