Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BHV55_RS06260 Genome accession   NZ_CP049978
Coordinates   1217787..1217963 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus sp. RZ2MS9     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
IScluster/Tn 1218956..1220387 1217787..1217963 flank 993


Gene organization within MGE regions


Location: 1217787..1220387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BHV55_RS06260 (BHV55_06260) comZ 1217787..1217963 (+) 177 WP_001986215.1 ComZ family protein Regulator
  BHV55_RS06265 (BHV55_06265) - 1218225..1218680 (-) 456 WP_070757211.1 hypothetical protein -
  BHV55_RS06270 (BHV55_06270) - 1218956..1220387 (+) 1432 Protein_1145 IS4 family transposase -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=429092 BHV55_RS06260 WP_001986215.1 1217787..1217963(+) (comZ) [Bacillus sp. RZ2MS9]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=429092 BHV55_RS06260 WP_001986215.1 1217787..1217963(+) (comZ) [Bacillus sp. RZ2MS9]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATTGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAAGCTTACGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586