Detailed information NTG0429091

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: BHV55_RS06240
• Genome accession: NZ_CP049978
• Coordinates: 1213118..1215718 (+)
• Length: 866 a.a.
• NCBI ID: WP_000365401.1
• Uniprot ID: A0A9W5QJY6
• Organism: Bacillus sp. RZ2MS9
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1208118..1220718

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BHV55_RS06200 (BHV55_06200)	-	1208578..1208841 (+)	264	WP_001153796.1	hypothetical protein	-
BHV55_RS06205 (BHV55_06205)	prsA	1208882..1209739 (-)	858	WP_070757212.1	peptidylprolyl isomerase PrsA	-
BHV55_RS06210 (BHV55_06210)	-	1209869..1210000 (-)	132	WP_001120851.1	DUF3941 domain-containing protein	-
BHV55_RS06215 (BHV55_06215)	-	1210101..1210958 (+)	858	WP_000364432.1	YitT family protein	-
BHV55_RS06220 (BHV55_06220)	-	1210984..1211181 (-)	198	WP_000527407.1	DUF3813 domain-containing protein	-
BHV55_RS06225 (BHV55_06225)	-	1211182..1211322 (-)	141	WP_000516816.1	hypothetical protein	-
BHV55_RS06230 (BHV55_06230)	-	1211428..1212237 (-)	810	WP_001041232.1	Cof-type HAD-IIB family hydrolase	-
BHV55_RS06235 (BHV55_06235)	-	1212729..1212908 (+)	180	WP_000531421.1	YjzC family protein	-
BHV55_RS06240 (BHV55_06240)	clpC	1213118..1215718 (+)	2601	WP_000365401.1	ATP-dependent chaperone ClpB	Regulator
BHV55_RS06245 (BHV55_06245)	-	1215757..1215939 (-)	183	WP_001211116.1	YjzD family protein	-
BHV55_RS06250 (BHV55_06250)	-	1216096..1216830 (+)	735	WP_000028691.1	hydrolase	-
BHV55_RS06255 (BHV55_06255)	-	1216860..1217732 (+)	873	WP_016109546.1	NAD(P)-dependent oxidoreductase	-
BHV55_RS06260 (BHV55_06260)	comZ	1217787..1217963 (+)	177	WP_001986215.1	ComZ family protein	Regulator
BHV55_RS06265 (BHV55_06265)	-	1218225..1218680 (-)	456	WP_070757211.1	hypothetical protein	-
BHV55_RS06270 (BHV55_06270)	-	1218956..1220387 (+)	1432	Protein_1145	IS4 family transposase	-

Sequence

Protein

• Length: 866 a.a.
• Molecular weight: 97382.35 Da
• Isoelectric Point: 5.1561

>NTDB_id=429091 BHV55_RS06240 WP_000365401.1 1213118..1215718(+) (clpC) [Bacillus sp. RZ2MS9]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEALKQGAESLIKKKPSVTGSGAE
VGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLLAFSEEKGDINQLFTRLHITKDNLLQSLMTVRGNQRVTSQNPEAT
YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE
HLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHIT
VELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVHVK

Nucleotide

• Length: 2601 bp

>NTDB_id=429091 BHV55_RS06240 WP_000365401.1 1213118..1215718(+) (clpC) [Bacillus sp. RZ2MS9]
ATGGACTTAAATCAAATGACAACAAAAACACAAGAGGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCATCACCA
AGAGGTGGATACTGTTCATCTATTACTTGCATTATTAGAAGAGCAAGATGGATTAGCAGTACGTATATTTCAAAAAATGA
ATGTTGATATAGAAGCATTAAAGCAAGGTGCTGAAAGTTTAATTAAAAAGAAACCTTCTGTAACGGGGAGCGGTGCAGAA
GTTGGAAAATTGTATGTAACGAGCGCTCTGCAACAACTGCTTGTAAGAGCAGGGAAAGAAGCAGAAAAACTGCAGGATGA
TTACATTTCAGTAGAACATGTGTTGCTTGCTTTTTCTGAAGAAAAAGGCGATATAAATCAATTATTTACAAGATTGCATA
TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACGAGTCAAAATCCAGAAGCAACT
TATGAAGCGTTAGAAAAATATGGTCGTGATTTAGTGGCGGAAGTGAGAGCAGGGAAAATCGATCCTGTAATCGGCCGTGA
TAGTGAAATACGACGTGTAATCCGTATTCTTTCACGTAAAACGAAAAACAATCCGGTTTTAATTGGGGAGCCAGGTGTTG
GTAAAACAGCAATCGTTGAAGGGCTAGCCCAGCGTATTGTGAAAAAGGATGTACCTGAAGGATTGAAAGATAGAACGATT
TTTGCGTTAGATATGAGTGCACTCGTAGCTGGTGCGAAATTCCGTGGTGAGTTCGAAGAGCGTCTGCAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGACGCATTTTATTATTCATTGATGAACTTCATACAATAGTTGGAGCTGGTAAAACAGAAG
GAGCCATGGATGCAGGAAATATGTTAAAACCGATGCTTGCGCGTGGTGAACTGCATTGTATCGGGGCGACGACGCTCGAT
GAATATCGCAAATATATTGAGAAAGATCCAGCGCTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAACCAACTGTTGA
AGATACAATTTCAATTTTACGTGGATTAAAAGAACGCTTTGAAATTTATCACGGTGTAAATATTCATGACCGTGCGATTG
TAGCAGCGTCAGTTTTATCAGATCGATATATTTCAGATCGATTCTTACCTGATAAAGCAATTGACCTTGTTGATGAAGCG
TGTGCAACAATTCGTACAGAAATCGATTCTATGCCAACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGCTGGAAAT
TGAAGAAGCGGCTCTTGGAAAAGAAACGGATCGTGGTAGCCAAGAGCGTCTAAAAACATTGCAACGTGAATTATCGGATT
TAAAAGAAGTTGCAAGTGGTATGAGAGCAAAGTGGGAGAAAGAAAAAGAAGACATTCACAAAGTTCGTGACTTACGTGAA
CATTTAGAACGTCTGCGTCGTGAATTAGAAGAAGCAGAAGGTAATTACGATTTAAATAAAGCAGCCGAACTTCGTCACGG
GAAAATTCCAGCAATTGAAAAAGAGTTAAAAGAAGCGGAAGAAATGGGCGCGCATAATAAACAAGAAAATCGTTTATTAC
GTGAGGAAGTAAGTGAAGAAGAAATTGCAGATATTGTTTCACGCTGGACGGGTATTCCTGTTGCGAAACTCGTGGAAGGT
GAACGCGAGAAATTATTACGCTTAGAGCAAATCTTATCAGAGCGTGTCATCGGACAAGAGGAAGCAGTAAGCTTAGTGTC
AGACGCAGTTCTTCGTGCTCGCGCTGGTATTAAAGATCCGAACCGCCCGATTGGTTCTTTCATCTTCTTAGGACCAACAG
GTGTTGGTAAAACAGAACTTGCAAAAACGTTAGCGCAGTCTTTATTCGATAGTGAAGAGCAAATGATTCGCATTGACATG
TCTGAGTATATGGAGAAACACGCAGTGTCACGCTTAATTGGTGCACCTCCTGGATATGTAGGATATGAGGAAGGTGGTCA
ATTAACAGAAGCGGTAAGACGTAAACCATATTCCGTTGTTTTATTAGATGAAATTGAAAAAGCACATCCAGAAGTATTCA
ACATTTTATTACAAATGTTAGATGATGGGCGCATTACAGATTCGCAAGGTCGTACAGTGGACTTTAAAAATACAGTTATT
ATTATGACTTCAAATATTGGATCTGCTCATTTACTAGATGGATTAGAAGAAGATGGTTCGATTAAAGAGGAATCAAGAGA
TCTTGTAATGGGACAATTAAGAGGACATTTCCGCCCTGAATTTTTAAACCGTGTTGATGAAATTATTTTATTCAAACCTC
TTACAACGAATGAAATTAAAGGCATTGTTGATAAAATTGTAAAAGAACTACAAGGTCGTCTAGCTGACCGTCACATTACA
GTAGAATTAACAGATGCAGCAAAAGAATTTGTTGTAGAAGCTGGTTTCGACCCAATGTACGGAGCTCGTCCATTAAAACG
ATACGTACAGCGTCAAGTGGAAACGAAATTAGCACGAGAATTAATTGCAGGAACAATTACTGACAATAGTCACGTAGTTG
TTGATGTAGAAAATAACGAATTAGTCGTTCATGTGAAATAA

Domains

Predicted by InterproScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (602-768)

• AAA lid domain (AAA_lid_9) (345-447)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-148)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-68)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (774-854)

• ATPase family associated with various cellular activities (AAA) (AAA) (206-339)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	48	100	0.485
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	42.153	100	0.425
clpC	Lactococcus lactis subsp. cremoris KW2	47.059	82.448	0.388