Detailed information NTG0429015

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: G6Z48_RS15395
• Genome accession: NZ_CP049956
• Coordinates: 3225914..3227287 (+)
• Length: 457 a.a.
• NCBI ID: WP_005410795.1
• Uniprot ID: A0A854E393
• Organism: Stenotrophomonas maltophilia strain NCTC10498
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3220914..3232287

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G6Z48_RS15380	sucD	3221816..3222691 (-)	876	WP_005410793.1	succinate--CoA ligase subunit alpha	-
G6Z48_RS15385	sucC	3222713..3223882 (-)	1170	WP_004154430.1	ADP-forming succinate--CoA ligase subunit beta	-
G6Z48_RS15390	-	3224240..3225853 (+)	1614	WP_065183900.1	ATP-binding protein	-
G6Z48_RS15395	pilR	3225914..3227287 (+)	1374	WP_005410795.1	sigma-54 dependent transcriptional regulator	Regulator
G6Z48_RS15400	pilB	3227413..3229146 (-)	1734	WP_005414305.1	type IV-A pilus assembly ATPase PilB	Machinery gene
G6Z48_RS15405	-	3229369..3229782 (-)	414	WP_099527264.1	pilin	-
G6Z48_RS15410	pilA/pilAI	3229915..3230337 (-)	423	WP_099527265.1	pilin	Machinery gene
G6Z48_RS15415	pilC	3230690..3231949 (+)	1260	WP_088430641.1	type II secretion system F family protein	Machinery gene

Sequence

Protein

• Length: 457 a.a.
• Molecular weight: 49515.76 Da
• Isoelectric Point: 6.4407

>NTDB_id=429015 G6Z48_RS15395 WP_005410795.1 3225914..3227287(+) (pilR) [Stenotrophomonas maltophilia strain NCTC10498]
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPDGNGIELVSEIAQHYPRTPVA
MITAFGSMDLAVEALKAGAFDFVSKPVDISVLRGLVKHALELNNAERPAPGPNAEQGGRLLGHSQAMDVLRTTIGKVARS
QAPVYILGESGVGKELVARTIHAQGARAAGPFVPVNCGAIPGELMESEFFGHRKGSFSGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRAVGAANEEPVDVRILSATHKDLAELVEDGRFRHDLYYRINVIELKVPPLRERRQDLPE
LAAAVLARLARSHGRATPLLAPSALEALAQYAFPGNVRELENILERALALAEEDCIGADDLRLPQHAPRAPGSAAPAEAV
ADLQPGSAALPSYIEQLERSAIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME

Nucleotide

• Length: 1374 bp

>NTDB_id=429015 G6Z48_RS15395 WP_005410795.1 3225914..3227287(+) (pilR) [Stenotrophomonas maltophilia strain NCTC10498]
ATGAATGAAACCCGCAGCGCCCTCGTCGTCGACGACGAACGCGACATCCGCGAACTGCTGGTGCTGACCCTCGGCCGCAT
GGGGCTGCGCATCAGTACCGCCGCCAACCTGGCCGAGGCACGTGAGCTGCTGGCCAGCAATCCGTACGACCTGTGCATCA
CCGACATGCGCCTGCCCGATGGCAACGGCATCGAACTGGTCAGCGAGATCGCCCAGCACTACCCGCGCACGCCGGTGGCG
ATGATCACCGCATTCGGCAGCATGGATCTCGCCGTGGAGGCACTGAAGGCCGGTGCGTTCGATTTCGTCAGCAAGCCGGT
GGACATCTCGGTGCTGCGCGGACTGGTCAAGCACGCGCTGGAACTCAACAACGCCGAGCGCCCCGCACCGGGCCCCAACG
CCGAACAGGGCGGGCGCCTGCTGGGCCACTCGCAGGCCATGGATGTGCTGCGCACCACCATCGGCAAGGTCGCGCGCAGC
CAGGCGCCGGTCTACATCCTCGGCGAGTCGGGCGTCGGCAAGGAGCTGGTTGCACGCACCATCCATGCCCAGGGCGCGCG
CGCGGCCGGCCCGTTCGTGCCGGTCAACTGCGGTGCCATTCCCGGCGAGCTGATGGAGAGCGAATTCTTCGGCCACCGCA
AGGGCAGTTTCAGCGGCGCACACGCTGACAAGCCTGGCCTGTTCCAGGCTGCGCACGGCGGCACCCTGTTCCTGGACGAA
GTGGCTGAACTGCCGCTGCAGATGCAGGTGAAGCTGCTGCGCGCGATCCAGGAAAAGTCGGTGCGCGCGGTGGGCGCGGC
CAACGAGGAGCCGGTGGATGTCCGCATCCTCTCGGCCACCCACAAGGACCTGGCCGAGCTGGTCGAGGACGGGCGCTTCC
GCCACGACCTGTACTACCGCATCAACGTGATCGAACTGAAGGTGCCGCCACTGCGCGAACGCCGCCAGGACCTGCCCGAA
CTGGCCGCGGCCGTGCTGGCCCGCCTGGCCCGCAGCCACGGCCGCGCCACCCCGCTGCTGGCGCCCTCGGCGCTGGAAGC
ACTGGCGCAGTACGCGTTCCCGGGCAATGTGCGCGAGCTGGAAAACATCCTGGAGCGTGCGCTGGCCCTGGCCGAAGAAG
ACTGCATCGGCGCCGATGACCTGCGCCTGCCGCAGCACGCGCCGCGTGCTCCCGGCAGTGCGGCGCCCGCCGAAGCCGTG
GCCGACCTGCAGCCGGGCAGTGCCGCCCTGCCCTCCTACATCGAGCAGCTCGAGCGCAGCGCCATCCAGCGTGCGCTGGA
AGAGAACCGCTGGAACAAGACCCGTACCGCCGCGCAGCTGGGCATCACCTTCCGTGCGCTGCGCTACAAGCTGAAGAAGC
TGGGGATGGAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (414-454)

• Response regulator receiver domain (Response_reg) (8-115)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

3D structure

• AlphaFold DB: A0A854E393

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.656	99.344	0.632
pilR	Acinetobacter baumannii strain A118	48.38	100	0.49
luxO	Vibrio cholerae strain A1552	37.079	97.374	0.361