Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   G8D99_RS03590 Genome accession   NZ_CP049916
Coordinates   768161..768544 (+) Length   127 a.a.
NCBI ID   WP_166322719.1    Uniprot ID   -
Organism   Acinetobacter lanii strain 185     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 763161..773544
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8D99_RS03580 (G8D99_03580) - 766085..767206 (-) 1122 WP_166322717.1 efflux RND transporter periplasmic adaptor subunit -
  G8D99_RS03585 (G8D99_03585) - 767240..767797 (-) 558 WP_166327488.1 hypothetical protein -
  G8D99_RS03590 (G8D99_03590) pilG 768161..768544 (+) 384 WP_166322719.1 twitching motility response regulator PilG Regulator
  G8D99_RS03595 (G8D99_03595) - 768569..768937 (+) 369 WP_166322721.1 response regulator -
  G8D99_RS03600 (G8D99_03600) - 768941..769477 (+) 537 WP_166322723.1 chemotaxis protein CheW -
  G8D99_RS03605 (G8D99_03605) - 769521..771581 (+) 2061 WP_166322725.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14222.31 Da        Isoelectric Point: 4.8836

>NTDB_id=428634 G8D99_RS03590 WP_166322719.1 768161..768544(+) (pilG) [Acinetobacter lanii strain 185]
MDDKLQNLKVMVIDDSKTIRRTAETLLQREGFNVVTAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVTA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=428634 G8D99_RS03590 WP_166322719.1 768161..768544(+) (pilG) [Acinetobacter lanii strain 185]
ATGGACGATAAATTGCAGAATCTTAAAGTCATGGTCATTGATGATTCAAAGACGATTCGTCGTACAGCTGAAACATTATT
ACAGCGTGAGGGGTTTAATGTTGTAACAGCCGTGGATGGTTTTGAAGCATTGTCTAAAATTGCAGAAGCCAATCCAGACA
TCGTTTTTGTCGATATTATGATGCCACGTCTTGATGGTTATCAAACCTGTGCATTGATCAAAAATTCACAAAATTATCAA
AATATTCCGGTCATTATGTTATCGAGTAAAGACGGTTTATTCGATCAGGCTAAAGGACGTGTCGTAGGTTCAGATGAATA
CTTGACCAAGCCTTTTAGTAAAGATGAGCTATTAAATGCAATTCGCAATCATGTAACAGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

93.701

100

0.937
  vicR Streptococcus mutans UA159

41.88

92.126

0.386
  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37