Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   G8E00_RS12365 Genome accession   NZ_CP049801
Coordinates   2747044..2747427 (-) Length   127 a.a.
NCBI ID   WP_166010270.1    Uniprot ID   -
Organism   Acinetobacter shaoyimingii strain 323-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2742044..2752427
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8E00_RS12350 (G8E00_12345) - 2743914..2746067 (-) 2154 WP_166225011.1 methyl-accepting chemotaxis protein -
  G8E00_RS12355 (G8E00_12350) - 2746110..2746646 (-) 537 WP_166010274.1 chemotaxis protein CheW -
  G8E00_RS12360 (G8E00_12355) - 2746650..2747018 (-) 369 WP_166010272.1 response regulator -
  G8E00_RS12365 (G8E00_12360) pilG 2747044..2747427 (-) 384 WP_166010270.1 twitching motility response regulator PilG Regulator
  G8E00_RS12370 (G8E00_12365) - 2747703..2748347 (+) 645 WP_227591369.1 hypothetical protein -
  G8E00_RS12375 (G8E00_12370) - 2748375..2749496 (+) 1122 WP_166225014.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14251.39 Da        Isoelectric Point: 4.8836

>NTDB_id=427913 G8E00_RS12365 WP_166010270.1 2747044..2747427(-) (pilG) [Acinetobacter shaoyimingii strain 323-1]
MDDKLQNLKIMVIDDSKTIRRTAETLLQREGFNVVTAVDGFEALSKIAEVNPDIVFVDIMMPRLDGYQTCALIKNSQSYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLTAIRNHVQA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=427913 G8E00_RS12365 WP_166010270.1 2747044..2747427(-) (pilG) [Acinetobacter shaoyimingii strain 323-1]
ATGGACGATAAATTGCAAAATCTCAAAATTATGGTCATTGATGATTCGAAAACGATACGCCGAACAGCTGAGACTTTATT
ACAGAGAGAAGGTTTTAATGTAGTCACCGCTGTAGATGGTTTTGAAGCGCTTTCAAAGATCGCTGAAGTGAATCCAGATA
TTGTTTTTGTCGATATTATGATGCCGCGTTTAGATGGATATCAAACGTGTGCGTTGATCAAGAATTCTCAAAGTTATCAA
AATATCCCAGTCATTATGCTGTCGAGTAAAGACGGGTTATTTGATCAAGCTAAAGGTCGCGTAGTCGGCTCAGATGAATA
TCTTACAAAACCGTTTAGTAAAGACGAGTTATTAACAGCAATTCGTAATCACGTTCAAGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

90.551

100

0.906
  vicR Streptococcus mutans UA159

42.373

92.913

0.394
  pilH Synechocystis sp. PCC 6803

40.708

88.976

0.362