Detailed information    

insolico Bioinformatically predicted

Overview


Name   vicK   Type   Regulator
Locus tag   G7052_RS04805 Genome accession   NZ_CP049799
Coordinates   966784..968136 (+) Length   450 a.a.
NCBI ID   WP_111676637.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 1040     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 961784..973136
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G7052_RS04780 (G7052_04780) - 961933..962082 (+) 150 WP_002990686.1 hypothetical protein -
  G7052_RS04785 (G7052_04785) - 962477..963625 (+) 1149 WP_032460078.1 acetyl-CoA C-acyltransferase -
  G7052_RS04790 (G7052_04790) - 963582..964829 (+) 1248 WP_136274036.1 AMP-binding protein -
  G7052_RS04795 (G7052_04795) - 964885..965919 (+) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  G7052_RS04800 (G7052_04800) vicR 966081..966791 (+) 711 WP_002985645.1 response regulator YycF Regulator
  G7052_RS04805 (G7052_04805) vicK 966784..968136 (+) 1353 WP_111676637.1 cell wall metabolism sensor histidine kinase VicK Regulator
  G7052_RS04810 (G7052_04810) vicX 968140..968949 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  G7052_RS04815 (G7052_04815) rnc 969392..970084 (+) 693 WP_002990670.1 ribonuclease III -

Sequence


Protein


Download         Length: 450 a.a.        Molecular weight: 51433.90 Da        Isoelectric Point: 5.4026

>NTDB_id=427882 G7052_RS04805 WP_111676637.1 966784..968136(+) (vicK) [Streptococcus pyogenes strain 1040]
MTRDIIGNLSTFELAILILLVFVAFYFIHLAVRDYRNARIIRMMSHKIRDLINGRYTDIIDEKADIELMELSDQLNDLSD
VFRLTHENLAQEKNRLASILAYMSDGVLATDRSGKIIMINETARKQLNLSKEEALKKNITDLLEGDTSYTYRDLVSKTPV
VTVNSRNDMGEFVSLRLRFALNRRESGFISGLVVVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALK
EDIAPSFIKVSLDETNRMMRMISDLLNLSRIDNQVTQLAVEMTNFTAFITSILNRFDLVKNQHTVTGKVYEIVRDYPITS
VWLEIDNDKMTQVIENILNNAIKYSPDGGKITVRMKTTDTQLIISISDQGLGIPKTDLPLIFDRFYRVDKARSRAQGGTG
LGLAIAKEIIKQHHGFIWAKSDYGKGSTFTIVLPYEKDAAIYEEWEEDVD

Nucleotide


Download         Length: 1353 bp        

>NTDB_id=427882 G7052_RS04805 WP_111676637.1 966784..968136(+) (vicK) [Streptococcus pyogenes strain 1040]
ATGACTAGAGATATCATTGGAAACTTATCCACATTTGAATTAGCGATCCTTATCTTACTTGTTTTTGTTGCTTTTTACTT
TATCCATCTTGCGGTGCGTGACTACCGAAATGCACGTATTATTCGGATGATGAGCCATAAAATCCGAGACTTGATTAATG
GTCGCTATACTGATATAATCGACGAAAAAGCAGACATTGAGTTAATGGAGCTTTCAGACCAGTTAAATGACCTGTCAGAT
GTTTTTCGCTTGACGCATGAAAATCTTGCCCAAGAAAAAAATCGCTTGGCAAGTATTTTGGCTTATATGTCAGATGGTGT
ACTTGCTACAGACCGGTCTGGTAAAATCATCATGATTAACGAGACAGCTCGCAAGCAATTAAATTTAAGTAAAGAAGAGG
CACTAAAGAAAAACATTACAGATTTGTTAGAAGGTGATACTTCATATACCTACCGTGATTTGGTATCCAAAACACCAGTG
GTAACTGTTAATAGCCGAAATGATATGGGTGAGTTTGTCTCATTACGCTTGCGTTTTGCGTTGAATAGGAGAGAGAGTGG
TTTTATTTCGGGCTTGGTTGTGGTGCTCCATGACACCACAGAACAAGAAAAAGAAGAACGTGAACGCCGTCTTTTTGTCT
CTAATGTAAGTCATGAATTAAGGACCCCTTTAACTTCGGTTAAATCCTACTTGGAGGCTCTTGATGAAGGTGCACTTAAA
GAAGATATTGCTCCAAGTTTCATAAAAGTTTCTCTTGATGAAACTAATCGGATGATGCGTATGATTTCAGATCTTTTAAA
CCTGTCTCGGATTGATAATCAAGTAACCCAATTAGCAGTAGAGATGACTAATTTTACTGCTTTTATAACTTCTATTTTAA
ACAGATTTGATTTGGTTAAAAATCAGCATACAGTTACAGGAAAAGTCTATGAAATTGTAAGAGATTACCCTATTACCTCT
GTCTGGCTTGAAATTGATAATGATAAAATGACACAGGTTATCGAGAATATTTTGAACAATGCCATTAAGTATTCTCCAGA
TGGTGGAAAAATTACAGTCCGTATGAAAACAACAGATACCCAATTAATTATTTCCATTTCAGACCAAGGACTAGGTATCC
CTAAAACAGATTTGCCTCTTATTTTTGATCGGTTCTATCGTGTAGACAAGGCAAGAAGTCGTGCCCAAGGAGGGACCGGT
CTAGGCCTTGCCATTGCTAAAGAAATCATCAAGCAGCACCATGGCTTTATCTGGGCTAAGAGTGACTATGGTAAAGGATC
GACCTTTACTATTGTCTTGCCTTATGAAAAAGATGCAGCCATCTATGAAGAATGGGAGGAAGATGTAGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

72.705

92

0.669

  micB Streptococcus pneumoniae Cp1015

67.765

94.444

0.64