Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   G7052_RS04810 Genome accession   NZ_CP049799
Coordinates   968140..968949 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 1040     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 963140..973949
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G7052_RS04790 (G7052_04790) - 963582..964829 (+) 1248 WP_136274036.1 AMP-binding protein -
  G7052_RS04795 (G7052_04795) - 964885..965919 (+) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  G7052_RS04800 (G7052_04800) vicR 966081..966791 (+) 711 WP_002985645.1 response regulator YycF Regulator
  G7052_RS04805 (G7052_04805) vicK 966784..968136 (+) 1353 WP_111676637.1 cell wall metabolism sensor histidine kinase VicK Regulator
  G7052_RS04810 (G7052_04810) vicX 968140..968949 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  G7052_RS04815 (G7052_04815) rnc 969392..970084 (+) 693 WP_002990670.1 ribonuclease III -
  G7052_RS04820 (G7052_04820) smc 970085..973624 (+) 3540 WP_136116246.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=427883 G7052_RS04810 WP_002985641.1 968140..968949(+) (vicX) [Streptococcus pyogenes strain 1040]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=427883 G7052_RS04810 WP_002985641.1 968140..968949(+) (vicX) [Streptococcus pyogenes strain 1040]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACTATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758