Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   IF736_RS01415 Genome accession   NZ_CP062350
Coordinates   246851..247840 (+) Length   329 a.a.
NCBI ID   WP_240018956.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NAS_AN_250     
Function   repress the expression of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 241851..252840
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IF736_RS01390 (IF736_01380) - 242597..243088 (+) 492 WP_000383814.1 DUF948 domain-containing protein -
  IF736_RS01395 (IF736_01385) - 243162..244520 (+) 1359 WP_031775018.1 hypothetical protein -
  IF736_RS01400 (IF736_01390) - 244655..244759 (+) 105 WP_001791758.1 hypothetical protein -
  IF736_RS01405 (IF736_01395) - 245220..246311 (+) 1092 WP_000066379.1 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase -
  IF736_RS01410 (IF736_01400) - 246665..246778 (+) 114 WP_001788994.1 hypothetical protein -
  IF736_RS01415 (IF736_01405) ccpA 246851..247840 (+) 990 WP_240018956.1 catabolite control protein A Regulator
  IF736_RS01420 (IF736_01410) - 247938..249107 (-) 1170 WP_240018957.1 acetoin utilization protein AcuC -
  IF736_RS01425 (IF736_01415) - 249132..249764 (-) 633 WP_001015996.1 hypothetical protein -
  IF736_RS01430 (IF736_01420) acsA 249932..251638 (+) 1707 WP_000862083.1 acetate--CoA ligase -

Sequence

Protein


Download         Length: 329 a.a.        Molecular weight: 35988.17 Da        Isoelectric Point: 5.7655

>NTDB_id=426830 IF736_RS01415 WP_240018956.1 246851..247840(+) (ccpA) [Staphylococcus aureus strain NAS_AN_250]
MTVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNGVIKRLNYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLAR
GLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGIIFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNID
FTEAAKEITGELIEKGAKSFALVGGEHSKKAQEDVLEGLTEVLNKNGLQLGDTLNCSGAESYKEGVKAFAKMKGNLPDAI
LCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRLVEMVRPQLSSVIQPLYDIGAVGMRLLTKYMNDEKIEEPNVVLPH
RIEYRGTTK

Nucleotide


Download         Length: 990 bp        

>NTDB_id=426830 IF736_RS01415 WP_240018956.1 246851..247840(+) (ccpA) [Staphylococcus aureus strain NAS_AN_250]
ATGACAGTTACTATATATGATGTAGCAAGAGAAGCACGTGTCTCTATGGCCACAGTGTCGCGTGTTGTTAATGGGAACCA
AAATGTTAAAGCAGAAACTAAAAATAAAGTTAACGGAGTCATTAAGCGTTTGAATTATCGTCCAAATGCTGTTGCTAGAG
GTTTAGCTAGTAAAAAGACAACAACAGTAGGTGTGATCATTCCAGATATATCTAATATCTATTATTCACAACTTGCTCGT
GGACTTGAAGATATTGCAACAATGTATAAATATCACTCAATTATTTCAAATTCAGATAACGATCCTGAAAAGGAAAAAGA
AATTTTTAATAACTTATTAAGTAAACAGGTTGATGGTATTATTTTCCTTGGTGGTACAATTACTGAAGAAATGAAAGAAT
TGATAAATCAATCATCTGTACCTGTAGTAGTATCAGGAACAAATGGTAAGGATGCACATATAGCATCAGTTAATATTGAT
TTTACTGAAGCTGCGAAAGAAATTACGGGAGAATTAATTGAAAAAGGCGCTAAATCATTTGCTTTAGTAGGTGGAGAACA
TTCTAAAAAAGCTCAAGAAGATGTTTTAGAAGGTTTAACTGAAGTGTTAAATAAAAATGGCCTTCAATTAGGTGATACAT
TGAATTGTTCTGGTGCTGAAAGTTATAAAGAAGGCGTAAAAGCTTTTGCCAAAATGAAAGGCAATTTGCCAGATGCCATT
TTATGTATCAGCGACGAAGAAGCAATTGGTATTATGCATAGTGCAATGGATGCTGGTATTAAAGTTCCAGAGGAATTACA
AATTATTAGTTTCAATAATACACGATTAGTTGAGATGGTTAGACCACAACTTTCTAGTGTTATTCAACCATTATATGATA
TCGGTGCAGTAGGGATGCGCTTATTAACAAAATATATGAACGATGAAAAGATAGAAGAACCAAATGTAGTTTTACCTCAC
AGAATTGAATACCGAGGAACTACAAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, lacI family (LacI)

(4-49)

Periplasmic binding protein-like domain (Peripla_BP_3)

(171-328)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

47.576

100

0.477
  ccpA Streptococcus gordonii str. Challis substr. CH1

46.809

100

0.468
  ccpA Streptococcus pneumoniae D39

45.897

100

0.459