Detailed information NTG0042598

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: GYO_RS35060
• Genome accession: NC_016047
• Coordinates: 2618559..2620889 (-)
• Length: 776 a.a.
• NCBI ID: WP_041521009.1
• Uniprot ID: -
• Organism: Bacillus spizizenii TU-B-10
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2613559..2625889

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GYO_RS35030 (GYO_2820)	-	2613897..2614235 (-)	339	WP_014114467.1	YqxA family protein	-
GYO_RS35035 (GYO_2821)	spoIIP	2614252..2615457 (-)	1206	WP_014114468.1	spore autolysin SpoIIP	-
GYO_RS35040 (GYO_2822)	gpr	2615520..2616626 (-)	1107	WP_014114469.1	GPR endopeptidase	-
GYO_RS35045 (GYO_2823)	rpsT	2616830..2617096 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
GYO_RS35050 (GYO_2824)	holA	2617111..2618154 (-)	1044	WP_014114470.1	DNA polymerase III subunit delta	-
GYO_RS43765 (GYO_2825)	-	2618194..2618343 (-)	150	WP_003229985.1	hypothetical protein	-
GYO_RS35055 (GYO_2826)	-	2618384..2618518 (+)	135	WP_003229983.1	YqzM family protein	-
GYO_RS35060 (GYO_2827)	comEC	2618559..2620889 (-)	2331	WP_041521009.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
GYO_RS35065 (GYO_2828)	-	2620893..2621462 (-)	570	WP_014114472.1	ComE operon protein 2	-
GYO_RS35070 (GYO_2829)	comEA	2621529..2622146 (-)	618	WP_014114473.1	helix-hairpin-helix domain-containing protein	Machinery gene
GYO_RS35075 (GYO_2830)	comER	2622230..2623051 (+)	822	WP_014114474.1	late competence protein ComER	-
GYO_RS35080 (GYO_2831)	-	2623117..2623860 (-)	744	WP_014114475.1	class I SAM-dependent methyltransferase	-
GYO_RS35085 (GYO_2832)	rsfS	2623857..2624213 (-)	357	WP_003237112.1	ribosome silencing factor	-
GYO_RS35090 (GYO_2833)	yqeK	2624231..2624791 (-)	561	WP_014114476.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
GYO_RS35095 (GYO_2834)	-	2624781..2625350 (-)	570	WP_014114477.1	nicotinate-nucleotide adenylyltransferase	-
GYO_RS35100 (GYO_2835)	yhbY	2625362..2625652 (-)	291	WP_014114478.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86674.28 Da
• Isoelectric Point: 8.4871

>NTDB_id=42598 GYO_RS35060 WP_041521009.1 2618559..2620889(-) (comEC) [Bacillus spizizenii TU-B-10]
MRNSRLVLPLAAASATAGITAAAYFSVVFLFLLFLLIVLIKTRHAFLIFVCFFSFILFFALYAVTDSQNVSLYQRGTYQF
KAVIDSIPKIDGDRMSMVVKTPDSEKWAASYRIQSADEKDRLSYIEPGMACELTGSLEEPKHSTVSGTFDYNEYLYRQHI
HWNYSVTSIQNCSDPANFKHKLLSLRKYIVSFTNDLLPPNSAGIVQALTVGDRFYVEEEVINAYQKLGVVHLLAISGLHI
GILTAGLFYIMIRIGITREKAAIMLLLFLPLYVMLTGAAPSVLRAALMSGIYLAGSLVKWRVHSAGAVCLSYIFLLLFNP
YYLFEAGFQLSFAVSFSLILSSSIFKRVKTFLGQLAMVSMIAQLGSLPVLLYHFQQFSMISIPMNMVLVPFYTFCVLPGA
VAGVFLLSLSASAGRLFFSWFDFLISWTNKLITKIAEIDIFTIIIARPAPALLFLFTVTIILLLMAIEKRSFSQLMVTGG
MCCAVLSLLFIYPRLSSEGEVDMIDIGQGDSMYVGAPHQRGHVLIDTGGTLSYLSEPWRQKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAETLLKHHKVKRLVIPKGFVSEPKDEKVLQAAREEGVPIEEVKRGDVLQIKDLQFHVLSPE
TPDPASKNNSSLVLWMKTGGMSWILTGDLEKEGEQEVMNVIPNIKADVLKVGHHGSKGSTGEEFIKQLQPKTAIISAGAN
NRYHHPHQEVLQILQRHSIRVLRTDQNGTIQYRYKNRVGTFSVYPPYDTSDITETN

Nucleotide

• Length: 2331 bp

>NTDB_id=42598 GYO_RS35060 WP_041521009.1 2618559..2620889(-) (comEC) [Bacillus spizizenii TU-B-10]
ATGCGTAATTCGCGTTTGGTATTGCCTTTGGCGGCAGCTTCGGCAACGGCTGGAATTACTGCCGCCGCTTATTTCTCCGT
TGTTTTTCTCTTCCTCCTCTTTCTTCTCATCGTTTTAATCAAAACGAGACACGCTTTTCTCATTTTTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGCACTGTATGCAGTGACAGATTCCCAGAATGTCTCTTTATATCAGCGGGGCACCTATCAATTC
AAGGCAGTGATTGACAGTATTCCTAAAATTGATGGTGACCGTATGTCTATGGTCGTTAAGACGCCTGATAGTGAAAAATG
GGCCGCATCGTATCGCATTCAGTCTGCTGATGAAAAAGATCGGCTTTCATACATAGAACCAGGAATGGCTTGTGAATTAA
CTGGTTCATTGGAAGAACCGAAACATTCAACTGTGTCGGGTACATTTGATTATAACGAATATCTTTACCGACAGCATATT
CACTGGAACTATTCTGTCACATCGATCCAAAATTGCAGCGACCCTGCAAATTTTAAGCATAAGCTGCTCAGTTTGAGGAA
ATACATTGTATCATTCACAAACGACCTGCTGCCTCCTAATTCGGCAGGAATCGTACAAGCACTTACAGTCGGTGACAGAT
TTTATGTGGAAGAAGAAGTGATTAACGCGTATCAAAAGCTTGGTGTCGTCCATCTCTTGGCGATTTCAGGACTCCACATC
GGCATTTTGACAGCCGGCTTGTTTTATATCATGATCCGTATTGGTATAACAAGAGAAAAGGCGGCAATCATGTTGCTGTT
ATTTCTGCCGCTCTATGTGATGTTGACGGGCGCTGCTCCTTCAGTGCTTCGCGCCGCTCTGATGTCGGGCATTTACTTAG
CAGGAAGTCTCGTGAAATGGCGTGTACATTCAGCCGGTGCTGTCTGCCTTTCATATATTTTCCTCTTGCTCTTCAATCCT
TATTATCTCTTCGAAGCCGGTTTTCAGCTGTCGTTCGCCGTCAGTTTTTCTTTAATACTTTCCTCTTCTATTTTTAAGCG
TGTCAAAACCTTCTTAGGTCAGCTGGCAATGGTATCGATGATCGCTCAGCTGGGCTCACTTCCTGTTCTCCTGTATCATT
TCCAGCAGTTTTCCATGATCAGCATACCGATGAACATGGTGCTGGTTCCTTTTTATACCTTCTGTGTTTTACCGGGGGCT
GTAGCAGGTGTTTTTCTATTAAGCCTTTCCGCTTCGGCCGGTCGATTGTTTTTCAGCTGGTTTGATTTCTTGATAAGCTG
GACCAACAAGCTCATCACAAAAATTGCAGAGATTGATATATTCACGATCATCATTGCACGTCCCGCACCTGCTCTGCTCT
TTTTGTTCACGGTTACGATCATCCTATTGCTTATGGCGATTGAAAAACGCTCCTTTTCGCAGCTGATGGTAACTGGCGGC
ATGTGCTGCGCTGTGCTCAGTCTTCTCTTTATTTATCCTCGTCTTAGTTCTGAAGGAGAGGTCGATATGATTGATATTGG
ACAGGGTGACAGCATGTATGTAGGTGCTCCGCATCAGCGGGGCCATGTCTTAATTGATACTGGCGGCACTTTGTCTTACT
TGTCAGAGCCTTGGCGGCAAAAACAGCACCCGTTTTCACTGGGAGAAAAGGTGCTGATTCCGTTTTTAACTGCTAAGGGA
ATTAAACAGCTTGATGCTTTAATTCTGACGCATGCTGACCAAGATCATATTGGGGAGGCGGAGACTCTGCTGAAGCATCA
TAAAGTGAAACGCCTCGTGATTCCGAAAGGGTTCGTGTCGGAACCTAAAGACGAAAAAGTGCTGCAGGCTGCCAGAGAGG
AGGGAGTCCCAATTGAAGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCGGAA
ACACCTGATCCGGCAAGCAAAAATAATTCTTCTCTTGTTCTGTGGATGAAAACGGGCGGTATGAGCTGGATCTTGACGGG
GGATCTGGAGAAAGAAGGGGAACAGGAGGTAATGAACGTGATTCCGAATATAAAAGCGGACGTATTAAAGGTGGGGCACC
ATGGAAGCAAAGGCTCTACCGGTGAAGAATTCATCAAACAGCTTCAGCCGAAAACGGCCATTATCTCGGCGGGGGCAAAC
AATCGGTACCATCATCCCCATCAAGAAGTTCTGCAAATATTACAGAGACATTCCATCCGCGTGCTCCGCACCGATCAAAA
CGGAACAATCCAATATAGATATAAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

• Domain of unknown function (DUF4131) (DUF4131) (21-170)

• Competence protein (Competence) (208-469)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	88.015	100	0.88