Detailed information NTG0425852

Bioinformatically predicted

Overview

• Name: sxy/tfoX
• Type: Regulator
• Locus tag: G5S55_RS14025
• Genome accession: NZ_CP049281
• Coordinates: 2666512..2666811 (-)
• Length: 99 a.a.
• NCBI ID: WP_000839141.1
• Uniprot ID: A0A2X2IWY1
• Organism: Shigella boydii strain 600657
• Function: positive regulator of competence gene (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	2665786..2666289	2666512..2666811	flank	223

Gene organization within MGE regions

Location: 2665786..2666811

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G5S55_RS14025 (G5S55_14025)	sxy/tfoX	2666512..2666811 (-)	300	WP_000839141.1	TfoX/Sxy family protein	Regulator

Sequence

Protein

• Length: 99 a.a.
• Molecular weight: 11453.10 Da
• Isoelectric Point: 8.6243

>NTDB_id=425852 G5S55_RS14025 WP_000839141.1 2666512..2666811(-) (sxy/tfoX) [Shigella boydii strain 600657]
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNGNAANLLI

Nucleotide

• Length: 300 bp

>NTDB_id=425852 G5S55_RS14025 WP_000839141.1 2666512..2666811(-) (sxy/tfoX) [Shigella boydii strain 600657]
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGCAGTTACAGCCTGACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACAGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATGGTAATGCTGCCAACTTACTGATTTAG

Domains

Predicted by InterproScan.

• TfoX N-terminal domain (TfoX_N) (14-94)

3D structure

• AlphaFold DB: A0A2X2IWY1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sxy/tfoX	Escherichia coli BW25113 strain K-12	100	91.919	0.919