Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   IF767_RS06950 Genome accession   NZ_CP062324
Coordinates   1368199..1368873 (-) Length   224 a.a.
NCBI ID   WP_001166505.1    Uniprot ID   Q2FIY0
Organism   Staphylococcus aureus strain NAS_OP_063     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1363199..1373873
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IF767_RS06935 (IF767_06920) vraG 1364382..1366271 (-) 1890 WP_240029429.1 FtsX-like permease family protein -
  IF767_RS06940 (IF767_06925) vraF 1366261..1367022 (-) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  IF767_RS06945 (IF767_06930) graS 1367166..1368206 (-) 1041 WP_001061252.1 histidine kinase GraS/ApsS -
  IF767_RS06950 (IF767_06935) braR 1368199..1368873 (-) 675 WP_001166505.1 response regulator transcription factor GraR/ApsR Regulator
  IF767_RS06955 (IF767_06940) graX 1368889..1369812 (-) 924 WP_000802946.1 auxiliary protein GraX/ApsX -
  IF767_RS06960 (IF767_06945) - 1369925..1370431 (+) 507 WP_000940134.1 GNAT family N-acetyltransferase -
  IF767_RS06965 (IF767_06950) - 1370640..1371068 (-) 429 WP_000198504.1 hypothetical protein -
  IF767_RS06970 (IF767_06955) - 1371397..1372440 (-) 1044 WP_001030771.1 alpha/beta hydrolase -
  IF767_RS06975 (IF767_06960) - 1372591..1373658 (-) 1068 WP_000980137.1 membrane protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26078.92 Da        Isoelectric Point: 4.3968

>NTDB_id=425820 IF767_RS06950 WP_001166505.1 1368199..1368873(-) (braR) [Staphylococcus aureus strain NAS_OP_063]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=425820 IF767_RS06950 WP_001166505.1 1368199..1368873(-) (braR) [Staphylococcus aureus strain NAS_OP_063]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2FIY0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402