Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   GYO_RS24495 Genome accession   NC_016047
Coordinates   548753..549703 (+) Length   316 a.a.
NCBI ID   WP_014112651.1    Uniprot ID   G4NQY8
Organism   Bacillus spizizenii TU-B-10     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 543753..554703
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GYO_RS24470 (GYO_0592) yclK 543806..545227 (+) 1422 WP_072565741.1 two-component system sensor histidine kinase YclK -
  GYO_RS24475 (GYO_0593) rapC 545390..546538 (+) 1149 WP_014112649.1 response regulator aspartate phosphatase RapC Regulator
  GYO_RS24480 (GYO_0594) phrC 546522..546644 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  GYO_RS24485 - 546743..546850 (-) 108 WP_041520857.1 YjcZ family sporulation protein -
  GYO_RS24490 (GYO_0595) - 547003..548367 (-) 1365 WP_014112650.1 aspartate kinase -
  GYO_RS24495 (GYO_0596) ceuB 548753..549703 (+) 951 WP_014112651.1 petrobactin ABC transporter permease YclN Machinery gene
  GYO_RS24500 (GYO_0597) yclO 549696..550643 (+) 948 WP_014112652.1 petrobactin ABC transporter permease YclO -
  GYO_RS24505 (GYO_0598) yclP 550637..551395 (+) 759 WP_014112653.1 petrobactin ABC transporter ATP-binding protein YclP -
  GYO_RS24510 (GYO_0599) yclQ 551417..552373 (+) 957 WP_014112654.1 petrobactin ABC transporter substrate-binding protein YclQ -
  GYO_RS24515 (GYO_0600) - 552419..553837 (-) 1419 WP_014112655.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34946.36 Da        Isoelectric Point: 9.9364

>NTDB_id=42559 GYO_RS24495 WP_014112651.1 548753..549703(+) (ceuB) [Bacillus spizizenii TU-B-10]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSTSPLMKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKNSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=42559 GYO_RS24495 WP_014112651.1 548753..549703(+) (ceuB) [Bacillus spizizenii TU-B-10]
ATGAAGTTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCTCGGCTCGGCATTTTAATTTCCTTGCTGCTGTTCACATCCACCAGTCCTTTAATGAAAATGCT
GGTCGCGTTCGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTCCAAGGAGACTTCTCTTTAGTGGTAAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTTATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGAGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
TTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTCTCGATTTACAGAGGAGACAATCTGAAGAACAGCCTGCCGCACAC
GGCGCTATTGGGAGCGGTTTTTGTGCTCTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTACGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NQY8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522

Multiple sequence alignment