Detailed information NTG0042557

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: GYO_RS24475
• Genome accession: NC_016047
• Coordinates: 545390..546538 (+)
• Length: 382 a.a.
• NCBI ID: WP_014112649.1
• Uniprot ID: G4NQY5
• Organism: Bacillus spizizenii TU-B-10
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 540390..551538

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GYO_RS24455 (GYO_0589)	-	540761..541441 (-)	681	WP_014112645.1	ABC transporter ATP-binding protein	-
GYO_RS24460 (GYO_0590)	-	541457..542923 (-)	1467	WP_014112646.1	ABC transporter permease	-
GYO_RS24465 (GYO_0591)	yclJ	543136..543819 (+)	684	WP_014112647.1	two-component system response regulator YclJ	-
GYO_RS24470 (GYO_0592)	yclK	543806..545227 (+)	1422	WP_072565741.1	two-component system sensor histidine kinase YclK	-
GYO_RS24475 (GYO_0593)	rapC	545390..546538 (+)	1149	WP_014112649.1	response regulator aspartate phosphatase RapC	Regulator
GYO_RS24480 (GYO_0594)	phrC	546522..546644 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
GYO_RS24485	-	546743..546850 (-)	108	WP_041520857.1	YjcZ family sporulation protein	-
GYO_RS24490 (GYO_0595)	-	547003..548367 (-)	1365	WP_014112650.1	aspartate kinase	-
GYO_RS24495 (GYO_0596)	ceuB	548753..549703 (+)	951	WP_014112651.1	petrobactin ABC transporter permease YclN	Machinery gene
GYO_RS24500 (GYO_0597)	yclO	549696..550643 (+)	948	WP_014112652.1	petrobactin ABC transporter permease YclO	-
GYO_RS24505 (GYO_0598)	yclP	550637..551395 (+)	759	WP_014112653.1	petrobactin ABC transporter ATP-binding protein YclP	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45621.68 Da
• Isoelectric Point: 4.9678

>NTDB_id=42557 GYO_RS24475 WP_014112649.1 545390..546538(+) (rapC) [Bacillus spizizenii TU-B-10]
MKSGVIPSSAVGQKINEWYKYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALDMAEAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIINSLPQAYFLITLIYYKRGKHDKASAYHKRGYEYAKETDDADYAIKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=42557 GYO_RS24475 WP_014112649.1 545390..546538(+) (rapC) [Bacillus spizizenii TU-B-10]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAAATATATCCGCACATTCAGCGT
ACCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCACGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGCCACCAGCTTATGCTTGATTATCTAGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCG
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTTGACTATTATGTGAATTTTTT
CCGCGGAATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATATTATAAACAGGCGGAGAAAAAGCTTTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCCTATTATTATATGAAGCAAACGTACTTT
TCACTGATCAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGGAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCGATATGGCCG
AAGCAGAACAAAAAGCCCAGCTGGTCGGAAGAGCATATTACAACCTTGGATTATGCTATTACAATCAAGACCTTCTTGAC
CCTGCTATTGACTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCAGGATCATCAATTCGCTGCCGCAAGCATATTT
TTTAATCACCCTGATTTATTATAAGCGGGGAAAACATGATAAAGCTTCGGCATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTACGCGATAAAATTCGAGTTTTTACAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAATACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

3D structure

• AlphaFold DB: G4NQY5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	97.906	100	0.979
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568