Detailed information NTG0424719

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: IHN52_RS17940
• Genome accession: NZ_CP062243
• Coordinates: 3697432..3698415 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain AML003_ev03
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3692432..3703415

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IHN52_RS17915	bcsF	3692593..3692784 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
IHN52_RS17920	bcsG	3692781..3694460 (+)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
IHN52_RS17925	ldrD	3694547..3694654 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
IHN52_RS17930	yhjV	3695130..3696401 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
IHN52_RS17935	dppF	3696431..3697435 (-)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
IHN52_RS17940	amiE	3697432..3698415 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
IHN52_RS17945	dppC	3698426..3699328 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
IHN52_RS17950	dppB	3699338..3700357 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
IHN52_RS22690	-	3700521..3700631 (+)	111	Protein_3551	hypothetical protein	-
IHN52_RS17955	dppA	3700665..3702272 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=424719 IHN52_RS17940 WP_001196486.1 3697432..3698415(-) (amiE) [Escherichia coli strain AML003_ev03]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=424719 IHN52_RS17940 WP_001196486.1 3697432..3698415(-) (amiE) [Escherichia coli strain AML003_ev03]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404