Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ST64987_RS05300 Genome accession   NZ_CP049053
Coordinates   993876..994688 (-) Length   270 a.a.
NCBI ID   WP_011681204.1    Uniprot ID   A0AAP2RND8
Organism   Streptococcus thermophilus strain ST64987     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 988876..999688
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST64987_RS05275 (ST64987_0996) - 989814..990200 (-) 387 WP_002953113.1 DUF1934 domain-containing protein -
  ST64987_RS05280 - 990292..991170 (-) 879 Protein_958 GNAT family N-acetyltransferase -
  ST64987_RS05285 (ST64987_0998) yidA 991378..992187 (+) 810 WP_011226081.1 sugar-phosphatase -
  ST64987_RS05290 (ST64987_0999) - 992189..993403 (+) 1215 WP_002953123.1 aminoacyltransferase -
  ST64987_RS05295 (ST64987_1000) - 993455..993816 (-) 362 Protein_961 YbaN family protein -
  ST64987_RS05300 (ST64987_1001) vicX 993876..994688 (-) 813 WP_011681204.1 MBL fold metallo-hydrolase Regulator
  ST64987_RS05305 (ST64987_1002) vicK 994694..996034 (-) 1341 WP_014621665.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ST64987_RS05310 (ST64987_1003) vicR 996027..996734 (-) 708 WP_024009930.1 response regulator YycF Regulator
  ST64987_RS05315 (ST64987_1004) - 997260..998027 (+) 768 WP_064355894.1 amino acid ABC transporter ATP-binding protein -
  ST64987_RS05320 (ST64987_1005) - 998039..998872 (+) 834 WP_022096756.1 transporter substrate-binding domain-containing protein -
  ST64987_RS05325 (ST64987_1006) - 998890..999588 (+) 699 WP_011681209.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30045.01 Da        Isoelectric Point: 5.5779

>NTDB_id=424477 ST64987_RS05300 WP_011681204.1 993876..994688(-) (vicX) [Streptococcus thermophilus strain ST64987]
MTSELGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKVDNSQKHIFSRGKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GLIENADGYLIESNHDIEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAYMTME
NQLARADFGVGTDFKIFGTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=424477 ST64987_RS05300 WP_011681204.1 993876..994688(-) (vicX) [Streptococcus thermophilus strain ST64987]
ATGACCTCAGAATTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACCGGGAATTCCTTTTATTTGGAAACTCCAGA
AAAGAAGATTCTAGTGGATGCTGGTTTATCAGGAAAAAAAATTACAAGTTTGCTAGCGGAGATTGACCGTGATCCAAGTG
ATCTTGATGCTATCTTAGTAACACATGAACACAAGGACCATATCCATGGTGTAGGTGTTTTAGCTCGTAAATACGGCATG
GATATATACGCCAATGAGAAAACCTGGCAAATTATGGATAGTAAGAATATGCTAGGTAAGGTTGATAATAGTCAGAAACA
TATTTTTTCTCGCGGTAAGCTTCTAACCTTTGGTGATATCGACATTGAATCTTTCGGAGTTAGTCATGATGCCATTGATC
CACAATTTTACCGCTTTATGAAAGACGGAAAGAGCTTTGTCATGTTGACGGATACAGGCTATGTTTCAGACCGTATGGCT
GGTCTTATTGAAAATGCTGATGGCTATCTGATTGAATCTAATCATGATATTGAAATCTTGAGAGCAGGTTCTTATCCTTG
GTCAACCAAGCAACGTATCCTCTCTGATCAGGGTCACTTGTGTAATGAGGATGGAGCCGATGCTATGATTCGTACCATCG
GTAATAAAACTAAAAAGATTTATCTGGGTCACCTTTCTAAAGAAAATAATATCAAGGAATTGGCCTACATGACGATGGAA
AATCAGTTGGCTCGCGCTGACTTTGGTGTTGGAACTGACTTTAAGATTTTTGGTACCTCACCAGATACGGCGACCCCACT
AACAGATATTTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.985

99.259

0.774