Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   G5S46_RS02295 Genome accession   NZ_CP048929
Coordinates   449710..450321 (+) Length   203 a.a.
NCBI ID   WP_050169631.1    Uniprot ID   -
Organism   Neisseria gonorrhoeae strain CT213     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 444710..455321
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G5S46_RS02270 (G5S46_02290) - 445156..445488 (+) 333 WP_003687908.1 hypothetical protein -
  G5S46_RS02275 (G5S46_02295) - 445819..446328 (+) 510 WP_003687909.1 isoprenylcysteine carboxyl methyltransferase family protein -
  G5S46_RS02280 (G5S46_02300) - 446558..447139 (-) 582 WP_003698180.1 superoxide dismutase -
  G5S46_RS02285 (G5S46_02305) dnaB 447302..448708 (+) 1407 WP_050171192.1 replicative DNA helicase -
  G5S46_RS02290 (G5S46_02310) pilH 449016..449678 (+) 663 WP_050162868.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  G5S46_RS02295 (G5S46_02315) pilV 449710..450321 (+) 612 WP_050169631.1 type IV pilus modification protein PilV Machinery gene
  G5S46_RS02300 (G5S46_02320) pilJ 450318..451298 (+) 981 WP_219501175.1 PilW family protein Machinery gene
  G5S46_RS02305 (G5S46_02325) pilK 451277..451885 (+) 609 WP_050171190.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  G5S46_RS02310 (G5S46_02330) pilL 451887..452360 (+) 474 WP_025455985.1 PilX family type IV pilin Machinery gene
  G5S46_RS02315 (G5S46_02335) - 452430..452738 (-) 309 WP_010359926.1 AzlD family protein -
  G5S46_RS02320 (G5S46_02340) - 452735..453445 (-) 711 Protein_458 AzlC family ABC transporter permease -
  G5S46_RS02325 (G5S46_02345) dut 453611..454063 (+) 453 WP_010359930.1 dUTP diphosphatase -

Sequence

Protein


Download         Length: 203 a.a.        Molecular weight: 22076.13 Da        Isoelectric Point: 4.8546

>NTDB_id=424217 G5S46_RS02295 WP_050169631.1 449710..450321(+) (pilV) [Neisseria gonorrhoeae strain CT213]
MKNNDCLRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDLDSNKKN
YSLYMGKQTLSAVDGKFMLDAEKSKAQLAEEQLKRFSHELKNALPDAVAIHYAVCKDSSGDAPTLSDSGAFSSNCDNKAN
GDTLIKVLWVNDSAGDSDISRTNLEVSGDNIVYTYQARVGGRE

Nucleotide


Download         Length: 612 bp        

>NTDB_id=424217 G5S46_RS02295 WP_050169631.1 449710..450321(+) (pilV) [Neisseria gonorrhoeae strain CT213]
ATGAAGAATAATGATTGCTTGCGCCTGAAAAATCCCCAGTCCGGTATGGCGTTGATAGAAGTCTTGGTCGCTATGCTCGT
TCTGACCATCGGTATTTTGGCATTGCTGTCCGTACAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCGGAAACGCAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAAGGAATGTTGATGAATCCGACCATTGATTTGGACAGCAACAAGAAAAAC
TATAGTCTTTACATGGGAAAACAGACACTATCAGCTGTGGATGGTAAGTTTATGCTTGATGCCGAGAAAAGTAAGGCGCA
GTTGGCAGAGGAACAATTGAAGAGATTTAGTCATGAGCTGAAAAATGCCTTGCCGGATGCGGTAGCTATTCATTACGCCG
TCTGCAAGGATTCGTCGGGTGACGCGCCGACATTGTCCGACAGCGGTGCTTTTTCTTCAAATTGCGACAATAAGGCAAAC
GGGGATACTTTGATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATTTCCCGTACGAATCTTGAAGTGAG
CGGCGACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGTGAATGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

89.372

100

0.911
  pilI Neisseria gonorrhoeae MS11

83.744

100

0.837
  pilV Neisseria gonorrhoeae MS11

83.744

100

0.837