Detailed information    

insolico Bioinformatically predicted

Overview

Name   comFA   Type   Machinery gene
Locus tag   G4P54_RS18275 Genome accession   NZ_CP048852
Coordinates   3463472..3464848 (-) Length   458 a.a.
NCBI ID   WP_167873447.1    Uniprot ID   A0A6H0WMZ8
Organism   Bacillus tequilensis strain EA-CB0015     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3458472..3469848
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4P54_RS18240 (G4P54_18190) flgL 3458637..3459533 (-) 897 WP_167873442.1 flagellar hook-associated protein FlgL -
  G4P54_RS18245 (G4P54_18195) flgK 3459543..3461066 (-) 1524 WP_167873443.1 flagellar hook-associated protein FlgK -
  G4P54_RS18250 (G4P54_18200) flgN 3461084..3461566 (-) 483 WP_167873444.1 flagellar protein FlgN -
  G4P54_RS18255 (G4P54_18205) flgM 3461582..3461848 (-) 267 WP_024714212.1 flagellar biosynthesis anti-sigma factor FlgM -
  G4P54_RS18260 (G4P54_18210) - 3461928..3462347 (-) 420 WP_024714213.1 TIGR03826 family flagellar region protein -
  G4P54_RS18265 (G4P54_18215) comFC 3462421..3463143 (-) 723 WP_167873445.1 phosphoribosyltransferase family protein Machinery gene
  G4P54_RS18270 (G4P54_18220) - 3463107..3463403 (-) 297 WP_167873446.1 late competence development ComFB family protein -
  G4P54_RS18275 (G4P54_18225) comFA 3463472..3464848 (-) 1377 WP_167873447.1 ATP-dependent helicase ComFA Machinery gene
  G4P54_RS18280 (G4P54_18230) - 3464960..3465805 (-) 846 WP_167873448.1 DegV family protein -
  G4P54_RS18285 (G4P54_18235) degU 3465903..3466592 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  G4P54_RS18290 (G4P54_18240) degS 3466675..3467832 (-) 1158 WP_167873449.1 two-component sensor histidine kinase DegS Regulator
  G4P54_RS18295 (G4P54_18245) - 3468049..3468702 (+) 654 WP_167873450.1 YigZ family protein -

Sequence

Protein


Download         Length: 458 a.a.        Molecular weight: 51611.58 Da        Isoelectric Point: 10.1152

>NTDB_id=423593 G4P54_RS18275 WP_167873447.1 3463472..3464848(-) (comFA) [Bacillus tequilensis strain EA-CB0015]
MPTVRNVSFSKELQQTLQSRHLLRTELPFSDELIEWHIGNGYIAAQNSISINKRGYRCNRCGQNDQRYFSFYHSSGKKQM
YCRSCVMMGRVSENVPLYSWKEENEANWQPVKLTWDGKLSSGQQKAADVLIEAISKKEELLIWAVCGAGKTEMLFPGIES
ALNQGLRVCIATPRTDVVLELAPRLKAAFQGADISALYGGSEDKGRISPLMISTTHQLLRYKNAFDVMIVDEVDAFPYSA
DQTLQFAVQKARKKNSTLVYLSATPPKELKRKTLNGQLHSVRIPARYHKKPLPEPRFVWCGNWKKKLSRNKIPSAVKRWI
EFHVKEGRPVFLFVPSVSVLGKAAACFKDVHCRTASVHAEDKCRKEKVQQFRDGQLDLLLTTTILERGVTVPKVQTGILG
AESSIFTESALVQIAGRTGRHKEHAGGDVIFFHYGKTKSMLDAKKHIKEMNDLAAKNG

Nucleotide


Download         Length: 1377 bp        

>NTDB_id=423593 G4P54_RS18275 WP_167873447.1 3463472..3464848(-) (comFA) [Bacillus tequilensis strain EA-CB0015]
TTGCCGACTGTAAGGAACGTTTCTTTCTCAAAAGAATTGCAGCAGACGCTTCAAAGCCGCCATCTGCTCAGAACTGAACT
CCCATTTTCCGATGAGCTGATTGAATGGCATATCGGGAATGGCTATATCGCCGCTCAAAACTCTATATCGATAAATAAAC
GGGGATATAGGTGTAATAGGTGCGGCCAAAATGATCAGCGGTATTTTTCTTTTTATCACTCATCTGGAAAGAAGCAGATG
TATTGCCGCTCCTGTGTCATGATGGGAAGGGTGAGTGAGAATGTGCCTCTATATTCATGGAAAGAAGAGAATGAAGCGAA
CTGGCAGCCTGTCAAGCTGACGTGGGATGGCAAGCTCTCAAGCGGACAGCAAAAGGCCGCCGATGTCTTAATCGAGGCAA
TATCAAAAAAGGAAGAGCTTCTCATCTGGGCGGTTTGCGGCGCTGGCAAAACAGAGATGCTATTCCCTGGTATAGAATCC
GCGCTAAATCAAGGACTGCGTGTATGCATTGCGACACCGCGCACCGATGTTGTATTAGAGCTTGCTCCCAGACTCAAGGC
TGCCTTTCAGGGCGCTGACATTTCAGCGCTTTACGGAGGAAGCGAGGACAAAGGACGTATATCTCCGCTTATGATTTCCA
CCACACATCAGCTTTTGCGTTATAAAAACGCATTCGATGTCATGATCGTTGATGAAGTTGATGCCTTTCCGTATTCTGCT
GATCAAACTCTTCAATTCGCTGTTCAGAAAGCAAGAAAGAAAAACAGCACTCTTGTTTACTTAAGTGCAACGCCCCCAAA
AGAATTAAAAAGAAAAACATTGAACGGACAGTTACATTCAGTTCGGATTCCAGCGAGATACCATAAGAAACCTCTGCCGG
AACCACGCTTTGTATGGTGCGGAAACTGGAAAAAGAAATTAAGCCGAAACAAAATTCCGTCAGCGGTAAAAAGATGGATA
GAGTTTCATGTGAAAGAAGGGAGGCCTGTTTTTTTATTTGTTCCCTCTGTTTCTGTTCTGGGAAAGGCAGCTGCCTGCTT
TAAAGATGTTCATTGCCGAACCGCGTCTGTGCATGCAGAAGACAAGTGCAGAAAAGAAAAAGTACAGCAGTTCAGAGACG
GCCAGCTTGATCTCTTACTCACAACAACAATACTAGAAAGAGGCGTCACAGTCCCAAAGGTGCAAACGGGTATATTAGGG
GCGGAATCGTCTATTTTTACGGAAAGCGCACTAGTTCAAATCGCAGGAAGAACAGGTCGGCATAAAGAGCATGCTGGCGG
TGATGTCATTTTCTTTCACTACGGTAAAACAAAGAGTATGCTGGATGCAAAAAAGCATATAAAAGAAATGAATGACTTGG
CAGCCAAAAATGGATGA

Domains

Predicted by InterproScan.

Helicase conserved C-terminal domain (Helicase_C)

(324-421)

Type III restriction enzyme, res subunit (ResIII)

(118-266)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6H0WMZ8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comFA Bacillus subtilis subsp. subtilis str. 168

90.351

99.563

0.9