NTDB

Overview

Name	comFC	Type	Machinery gene
Locus tag	G4P54_RS18265	Genome accession	NZ_CP048852
Coordinates	3462421..3463143 (-)	Length	240 a.a.
NCBI ID	WP_167873445.1	Uniprot ID	A0A6H0WQL2
Organism	Bacillus tequilensis strain EA-CB0015
Function	ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3457421..3468143

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G4P54_RS18230 (G4P54_18180)	fliW	3457563..3457994 (-)	432	WP_167873440.1	flagellar assembly protein FliW	-
G4P54_RS18235 (G4P54_18185)	-	3458015..3458590 (-)	576	WP_167873441.1	DUF6470 family protein	-
G4P54_RS18240 (G4P54_18190)	flgL	3458637..3459533 (-)	897	WP_167873442.1	flagellar hook-associated protein FlgL	-
G4P54_RS18245 (G4P54_18195)	flgK	3459543..3461066 (-)	1524	WP_167873443.1	flagellar hook-associated protein FlgK	-
G4P54_RS18250 (G4P54_18200)	flgN	3461084..3461566 (-)	483	WP_167873444.1	flagellar protein FlgN	-
G4P54_RS18255 (G4P54_18205)	flgM	3461582..3461848 (-)	267	WP_024714212.1	flagellar biosynthesis anti-sigma factor FlgM	-
G4P54_RS18260 (G4P54_18210)	-	3461928..3462347 (-)	420	WP_024714213.1	TIGR03826 family flagellar region protein	-
G4P54_RS18265 (G4P54_18215)	comFC	3462421..3463143 (-)	723	WP_167873445.1	phosphoribosyltransferase family protein	Machinery gene
G4P54_RS18270 (G4P54_18220)	-	3463107..3463403 (-)	297	WP_167873446.1	late competence development ComFB family protein	-
G4P54_RS18275 (G4P54_18225)	comFA	3463472..3464848 (-)	1377	WP_167873447.1	ATP-dependent helicase ComFA	Machinery gene
G4P54_RS18280 (G4P54_18230)	-	3464960..3465805 (-)	846	WP_167873448.1	DegV family protein	-
G4P54_RS18285 (G4P54_18235)	degU	3465903..3466592 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
G4P54_RS18290 (G4P54_18240)	degS	3466675..3467832 (-)	1158	WP_167873449.1	two-component sensor histidine kinase DegS	Regulator

Sequence

Protein

Download Length: 240 a.a. Molecular weight: 27432.93 Da Isoelectric Point: 10.0666

                                >NTDB_id=423592 G4P54_RS18265 WP_167873445.1 3462421..3463143(-) (comFC) [Bacillus tequilensis strain EA-CB0015]

MPHKAGGGVHKLICLLCDSQFSQAVTWRALFLLKPDEKVCHSCRSKFEKITGHICSLCGRPQSVPAVCRDCEAWKSRLSH

SLLLRQNRSVYTYNDMMKETLSRFKFRGDAEIINAFKTDFSSTFSEVYPDKHFVLVPIPLSKEREEERGFNQAQLLAECL

NRPIRRPLIRLNNEKQSKKKKMERLFSARIFDTKNNSVKGMNIILIDDLYTTGATLHFAARCLLEKGKAASVASFTLIRS

Nucleotide

Download Length: 723 bp

                                >NTDB_id=423592 G4P54_RS18265 WP_167873445.1 3462421..3463143(-) (comFC) [Bacillus tequilensis strain EA-CB0015]

ATGCCACACAAAGCAGGAGGGGGCGTTCATAAACTGATCTGTCTGCTATGCGATTCGCAATTTTCTCAAGCTGTTACATG

GAGAGCACTTTTTTTATTAAAACCTGACGAAAAGGTCTGTCATTCCTGCAGAAGCAAATTTGAAAAAATCACAGGACATA

TCTGCAGCCTGTGCGGCAGACCTCAATCCGTTCCTGCGGTATGCAGGGATTGCGAGGCATGGAAATCAAGGCTCAGTCAC

AGCTTGCTGCTCCGCCAAAACCGTTCAGTTTACACATATAATGATATGATGAAAGAAACGCTCTCCCGTTTTAAATTTAG

AGGAGATGCAGAAATCATAAATGCATTTAAAACTGACTTTTCTTCAACCTTTTCAGAGGTATACCCCGATAAGCATTTTG

TTCTCGTTCCAATTCCGCTGAGCAAGGAACGGGAGGAAGAGCGCGGATTTAATCAGGCTCAGCTCTTGGCAGAATGTTTA

AACCGGCCTATCCGCCGCCCCCTCATCCGCCTGAATAATGAGAAACAGTCAAAGAAAAAGAAAATGGAACGCCTGTTTTC

AGCGCGCATTTTTGACACGAAAAACAACTCAGTTAAAGGTATGAATATCATTTTAATAGACGATCTTTATACAACAGGCG

CCACTTTGCATTTTGCAGCGCGCTGTTTATTAGAGAAAGGAAAAGCCGCTTCAGTGGCATCCTTTACCTTGATCAGAAGC

TAA

Domains

Predicted by InterproScan.

Phosphoribosyl transferase domain (Pribosyltran)

(149-238)

Double zinc ribbon domain (DZR_2)

(14-71)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0A6H0WQL2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
comFC	Bacillus subtilis subsp. subtilis str. 168	87.5	100	0.875

Detailed information NTG0423592