Detailed information    

insolico Bioinformatically predicted

Overview

Name   recU   Type   Machinery gene
Locus tag   G4P54_RS11740 Genome accession   NZ_CP048852
Coordinates   2212910..2213530 (+) Length   206 a.a.
NCBI ID   WP_004398007.1    Uniprot ID   A0A9W5LEN4
Organism   Bacillus tequilensis strain EA-CB0015     
Function   plasmid transformation; homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2207910..2218530
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4P54_RS11700 (G4P54_11655) - 2209061..2209567 (-) 507 WP_024715292.1 PTS sugar transporter subunit IIA -
  G4P54_RS11705 (G4P54_11660) - 2209705..2210124 (+) 420 WP_024715291.1 Hsp20/alpha crystallin family protein -
  G4P54_RS11710 (G4P54_11665) - 2210145..2210516 (-) 372 WP_024715290.1 YppG family protein -
  G4P54_RS11715 (G4P54_11670) - 2210703..2210891 (+) 189 WP_167872745.1 YppF family protein -
  G4P54_RS11720 (G4P54_11675) - 2210931..2211302 (-) 372 WP_167872746.1 YppE family protein -
  G4P54_RS11725 (G4P54_11680) - 2211335..2211580 (-) 246 WP_024715287.1 YppD family protein -
  G4P54_RS11730 (G4P54_11685) sspM 2211778..2211882 (+) 105 WP_024715286.1 acid-soluble spore protein SspM -
  G4P54_RS11735 (G4P54_11690) - 2211907..2212869 (-) 963 WP_032682114.1 DUF2515 domain-containing protein -
  G4P54_RS11740 (G4P54_11695) recU 2212910..2213530 (+) 621 WP_004398007.1 Holliday junction resolvase RecU Machinery gene
  G4P54_RS11745 (G4P54_11700) - 2213552..2216284 (+) 2733 WP_167872747.1 PBP1A family penicillin-binding protein -
  G4P54_RS11750 (G4P54_11705) - 2216359..2216853 (-) 495 WP_024715282.1 YpoC family protein -
  G4P54_RS11755 (G4P54_11710) nth 2216850..2217509 (-) 660 WP_167872748.1 endonuclease III -
  G4P54_RS11760 (G4P54_11715) dnaD 2217528..2218226 (-) 699 WP_024715280.1 DNA replication protein DnaD -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23959.09 Da        Isoelectric Point: 9.6240

>NTDB_id=423562 G4P54_RS11740 WP_004398007.1 2212910..2213530(+) (recU) [Bacillus tequilensis strain EA-CB0015]
MIRYPNGKTFQPKHSVSSQNSQKRAPSYSNRGMTLEDDLNETNKYYLTNQIAVIHKKPTPVQIVNVHYPKRSAAVIKEAY
FKQSSTTDYNGIYKGRYIDFEAKETKNKTSFPLQNFHDHQIEHMKQVKAQDGICFVIISAFDQVYFLEADKLFYFWDRKE
KNGRKSIRKDELEEAAYPISLGYAPRIDYISIIEQLYFSPSSSAKG

Nucleotide


Download         Length: 621 bp        

>NTDB_id=423562 G4P54_RS11740 WP_004398007.1 2212910..2213530(+) (recU) [Bacillus tequilensis strain EA-CB0015]
GTGATTCGGTATCCTAACGGAAAAACGTTTCAGCCGAAACATTCGGTTTCATCCCAAAACAGTCAGAAAAGGGCTCCGTC
GTACAGTAATCGCGGAATGACCCTCGAAGATGACTTAAACGAAACGAATAAGTATTATCTGACAAACCAAATTGCCGTCA
TACACAAAAAGCCGACACCTGTTCAAATTGTAAATGTCCATTATCCAAAAAGAAGCGCCGCAGTGATTAAAGAAGCTTAC
TTTAAACAGTCATCGACAACAGATTATAACGGGATTTACAAAGGGCGGTATATTGATTTTGAGGCGAAAGAAACGAAAAA
CAAGACCTCTTTCCCCCTGCAGAATTTCCATGACCATCAAATCGAGCATATGAAACAGGTAAAGGCTCAAGACGGTATTT
GTTTTGTTATTATATCCGCTTTCGACCAAGTTTATTTTTTGGAAGCCGATAAGCTGTTTTATTTCTGGGACAGAAAAGAA
AAAAACGGCAGAAAATCAATTCGCAAAGATGAGTTAGAGGAAGCAGCGTATCCGATTTCTCTTGGATACGCACCTAGAAT
TGATTATATTAGTATTATTGAACAGCTTTATTTTTCGCCGTCATCAAGTGCGAAAGGTTGA

Domains

Predicted by InterproScan.

Recombination protein U (RecU)

(31-193)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recU Bacillus subtilis subsp. subtilis str. 168

99.029

100

0.99